HHsearch alignment for GI: 254780561 and conserved domain: PRK11622
>PRK11622 putative ABC transporter solute-binding protein; Provisional.
Probab=99.97 E-value=2.4e-27 Score=177.61 Aligned_cols=299 Identities=18% Similarity=0.203 Sum_probs=211.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCC--------CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHH
Q ss_conf 902799999999999999861467--------423488599997887785122338899999988488799997288689
Q gi|254780561|r 1 MKKFARIVVGIMMITGVISYCTLD--------GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 (338)
Q Consensus 1 MKk~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~v~~~~~~~~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~ 72 (338)
T Consensus 1 ~~r~~~~~~~~l~~~~~~~~~~~~~~~W~~i~~~A~GqtV~f~aWGGs~~iN~yi~w~~~~l~~~y~ItL~~Vk~~Dt~~ 80 (401)
T PRK11622 1 MMRHLLALLGLLALLSLAAAASDAANTWQQILEEAKGQTVYFNAWGGSPAINRYLDWVAKELKERYGITLKHVKLADIAE 80 (401)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHH
T ss_conf 95889999999998750145764448999999971698899997679577759999999999998596689952545899
Q ss_pred HHHHHHHHHC-----CCCCEEEECCCHHHHHHHHHHHCCC-CCC---CCHHHCC-------CCCCCCCCCCCCEEEEEEH
Q ss_conf 9978875312-----6641011013337899988752126-136---7700021-------0001243211532431000
Q gi|254780561|r 73 LLNKLRMEGE-----NSAADIVLGFDNNLIDLARKTGLFA-KSN---IDASQLK-------LPIKWDDDIFVPYDYGYLA 136 (338)
Q Consensus 73 ~~~~~~a~~~-----~~~~Dv~~~~~~~~~~~~~~~~l~~-~~~---~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 136 (338)
T Consensus 81 av~rvlaEk~AG~~~~GsvDliWINGENF~~m-K~~~LL~gp~~~~LPN~~~vd~~~~v~~DFg~PtdG~EaPWg~aQ~v 159 (401)
T PRK11622 81 AVNRLLAEKQAGRDTGGSVDLVWINGENFRTL-KEAGLLYGPFAETLPNWRYVDTQLPVREDFGVPTEGLEAPWGVAQLV 159 (401)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHH-HHCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 99999999860778898445899886128988-86783138766659404205887553555787366551676553189
Q ss_pred HHHCCCCCCCCCCCHHHHCC--CCCCCEEEEEECCCCCCHHHHHHHHHHHCCC------------------CHHHHHHHH
Q ss_conf 11001112458764565212--0006828985047653036789999871773------------------137898777
Q gi|254780561|r 137 FIYDKRQITQPPKNFDELIN--STKPWKIIYQDPRTSTLGLGLLLWIQKIYGD------------------NSAQVWKKI 196 (338)
Q Consensus 137 ~~y~~~~~~~~p~s~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~ 196 (338)
T Consensus 160 f~ydsa~v~~pP~s~~eLl~wak~nPGrfTYP~PPdF~GstFlkq~L~~l~~~~~~l~~p~~~~~~~~~~~plW~yLd~l 239 (401)
T PRK11622 160 FIYDSARVPQPPQSPAELLEWAKANPGRFTYPRPPDFTGTAFLKQLLIELTGDPAALKQPVDDATFARVTAPLWDYLDEL 239 (401)
T ss_pred EEECHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99876655999989999999999789971489999875379999999997398567518678899998738999999985
Q ss_pred H----HCCCEEECCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHC--CCCEEEEECCCCEEEEEEEEEEECCCCCHHHHH
Q ss_conf 6----2884683084789888622586569995044999998507--997378831698088886424337899989999
Q gi|254780561|r 197 A----TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG--QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 (338)
Q Consensus 197 ~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~eG~~~~~~~~~i~k~a~n~~~A~ 270 (338)
T Consensus 240 ~P~LWr~G~~yP~~~~~l~~L~adGEi~~~~sfnp~~a~~~I~~G~lP~t~r~~~~~~GtigN~hflAIP~NA~~kagA~ 319 (401)
T PRK11622 240 HPYLWRKGKTFPASPAELDQLLADGELDLAFTFNPNEAQAAIANGELPASTRSFAFSDGTIGNTHFVAIPFNANAKAGAK 319 (401)
T ss_pred CHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHH
T ss_conf 77888440126899999999984798778840387778889866999974026742698216765077207999877899
Q ss_pred HHHHHHCCHHHHHHHHHC-C-CEEECCC-CCCC
Q ss_conf 999996399999998850-4-5050557-6588
Q gi|254780561|r 271 EFMQFMISPSFQRILPTT-N-WMYPVVD-ISMP 300 (338)
Q Consensus 271 ~Fi~flls~e~Q~~~a~~-~-~~~P~~~-~~~p 300 (338)
T Consensus 320 VvaNfLLSPEAQ~~K~~p~~WGd~tVLd~~kL~ 352 (401)
T PRK11622 320 VVANFLLSPEAQLRKADPAVWGDPSVLDPQKLP 352 (401)
T ss_pred HHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHCC
T ss_conf 999996399999975386424885411645389