HHsearch alignment for GI: 254780561 and conserved domain: TIGR00971

>TIGR00971 3a0106s03 sulfate ABC transporter, sulfate-binding protein; InterPro: IPR005669 Thiosulphate-binding proteins (gene cysP) specifically binds thiosulphate and are involved in the transport systems for this nutrients , . There are two conserved regions in the protein, one located in the N-terminal region and the other in the central part of these proteins. The second pattern includes two adjacent amino acids (Ser-Gly) that, in sbp, are known to be essential for sulphate binding . ; GO: 0015419 sulfate transmembrane-transporting ATPase activity, 0008272 sulfate transport, 0030288 outer membrane-bounded periplasmic space.
Probab=99.39  E-value=6.5e-12  Score=87.68  Aligned_cols=249  Identities=14%  Similarity=0.166  Sum_probs=162.2

Q ss_pred             CCCCCHHHHHHHHHHH----HHHHC-CEEEEEE--CCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHC-CCCCC
Q ss_conf             7785122338899999----98848-8799997--288689997887531266410110133378999887521-26136
Q gi|254780561|r   39 SFVADEGAGPKIKQAF----ERKCN-CELKLIG--LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSN  110 (338)
Q Consensus        39 ~~~~~~~~~~~i~~~F----ek~~g-ikV~~~~--~~~~~~~~~~~~a~~~~~~~Dv~~~~~~~~~~~~~~~~l-~~~~~  110 (338)
T Consensus        20 SYD~~RELy~~~N~~F~~~W~~~~GGD~~~i~QSH~gs~KQA~~v~----~G~~ADvVT~~~~~DV~~~~~~G~lI~~~W   95 (320)
T TIGR00971        20 SYDVTRELYEQYNKAFEAHWKKDTGGDKVVIKQSHGGSGKQALSVL----NGLEADVVTLALAYDVQILAERGRLIDKDW   95 (320)
T ss_pred             CCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             3331069998718157875666448954789742688606889987----001255778888876899984387365468


Q ss_pred             CCHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCHHHHHHH-H----HHHC
Q ss_conf             7700021000124321153243100011001112458764565212000682898504765303678999-9----8717
Q gi|254780561|r  111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW-I----QKIY  185 (338)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~p~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~  185 (338)
T Consensus        96 ~~rLP~NS~P----------y~ST~~FLVRK-GNPK~I~DWnDL~~~~--v~~I~PNPK~SG~AR~~YLaAWG~A~~~~~  162 (320)
T TIGR00971        96 IKRLPDNSAP----------YTSTIVFLVRK-GNPKQIHDWNDLIKPG--VSVITPNPKSSGGARYNYLAAWGYALHADN  162 (320)
T ss_pred             HHHCCCCCCC----------CCEEEEEEEEC-CCCCCCCCHHHHHHCC--CEEEECCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             8628787886----------20133556754-7989646513463358--758607889864157899998766751378


Q ss_pred             CC--CHHHHHHHHHHCCCEEECCCHH-HHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCC-----EEEEEEEE
Q ss_conf             73--1378987776288468308478-9888622586569995044999998507997378831698-----08888642
Q gi|254780561|r  186 GD--NSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG-----HYLQIEVA  257 (338)
Q Consensus       186 ~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eG-----~~~~~~~~  257 (338)
T Consensus       163 ~D~aK~~~F~~~l~KNvEVlD~G~RGaT~TF~ERG~GDVLI~~E~E~~~~~~~~~~~~FE~V~P~~~ILAE~~V~~VDK~  242 (320)
T TIGR00971       163 GDKAKAEQFVKALLKNVEVLDSGARGATNTFVERGLGDVLIAFENEALLIRKELEKDKFEIVIPSESILAEPTVSVVDKV  242 (320)
T ss_pred             CCHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECC
T ss_conf             76245899999985010332068886521011106330013457889999996334872686477432135650357433


Q ss_pred             EEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCCHHHHCC
Q ss_conf             43378999899999999963999999988504505055765882134122
Q gi|254780561|r  258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR  307 (338)
Q Consensus       258 ~i~k~a~n~~~A~~Fi~flls~e~Q~~~a~~~~~~P~~~~~~p~~~~~~~  307 (338)
T Consensus       243 V~~~~T--~~~A~AYL~yLYSP~~Q~I~~~~-yYR~~~~~v~~K~~~~FP  289 (320)
T TIGR00971       243 VEKKGT--KKVAEAYLKYLYSPEGQEIIAKN-YYRVRDAEVAKKYEDKFP  289 (320)
T ss_pred             CCCCCH--HHHHHHHHHHHCCCCHHHHHHHC-CCCCCCHHHHHHHHCCCC
T ss_conf             032345--89999999740494135676542-678888889867751688