HHsearch alignment for GI: 254780561 and conserved domain: TIGR03227

>TIGR03227 PhnS 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein. This ABC transporter periplasmic substrate binding protein component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238). The protein contains a match to pfam01547 for the "Bacterial extracellular solute-binding protein" domain.
Probab=100.00  E-value=0  Score=339.93  Aligned_cols=318  Identities=16%  Similarity=0.241  Sum_probs=261.9

Q ss_pred             HHHHHHHCCCCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC
Q ss_conf             999986146742348859999788778-5122338899999988488799997288689997887531266410110133
Q gi|254780561|r   15 TGVISYCTLDGLPAKPVLTVYTYNSFV-ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD   93 (338)
Q Consensus        15 ~~~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~~~~~~~a~~~~~~~Dv~~~~~   93 (338)
T Consensus        22 ~~~~~~-~~~~a~a~~~~~vy~~~~~~~~~~~~~~~~~~aFek~tGikV~~v~~~-sge~laRl~aEk~nPqaDVv~~~d   99 (367)
T TIGR03227        22 AALLQG-AAAPAQAAAVVLVYSADGLEDGDNSLYQDQFDAFEKAEGIKVNIVEAG-GGEVVERAAKEKGNPKADVIVTAP   99 (367)
T ss_pred             HHHHHH-CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECC-HHHHHHHHHHCCCCCCCEEEEECC
T ss_conf             999864-235554586599996466434443468887688888669838999897-799999999522799720999785


Q ss_pred             HHHHHHHHHHHCCCCCCCCHHH-CCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCC
Q ss_conf             3789998875212613677000-210001243211532431000110011124587645652120006828985047653
Q gi|254780561|r   94 NNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST  172 (338)
Q Consensus        94 ~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~p~s~~~l~~~~~~~~~~~~~~~~~~  172 (338)
T Consensus       100 -~~~~~A~~~GLl~py~~~~~~~ip~~~k~~dg~~~~~~~~~~~~~yN~~~~k~~PkSW~DL~dP~ykgkI~~~dP~tS~  178 (367)
T TIGR03227       100 -PFIQQAAAEGLLANFNSDAAKAIPAIAKAADGLWAPFVKNYFSFAINPKLLKSAPASFADLLDADFKGKLAYSNPAQAA  178 (367)
T ss_pred             -HHHHHHHHCCCCCCCCCCCHHHCCHHHHCCCCCEEEEECCEEEEEEEHHHHCCCCCCHHHHHCCCCCCEEEECCCCCCH
T ss_conf             -7999999788956278966455777663779838988555799999857705799889987285337828952877661


Q ss_pred             CHHHHHHHHHHHCC--CCHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECC---
Q ss_conf             03678999987177--3137898777628846830847898886225865699950449999985079973788316---
Q gi|254780561|r  173 LGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS---  247 (338)
Q Consensus       173 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  247 (338)
T Consensus       179 ~g~~~l~~~~~~~G~eD~a~~~~~~L~~N~~~~~~s~~~~~~~~~~GE~~va~g~~~~-~~~~~~~~g~~v~~v~P~~~~  257 (367)
T TIGR03227       179 DGMAVIILAFALFGSEDAAFAYLAKLEANNKFHSAGTGKLNALLNKGEIAVANGDLQM-DLADAEHGGLNIKIFFPAADA  257 (367)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHCCCEEEEEEECCH-HHHHHHHCCCCCEEEEECCCC
T ss_conf             7999999999970985388999998874486724781799999857867899520204-367776279970289546777


Q ss_pred             ---CCEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCCC-CCHH----HHCCCCCCCCCCCHHH
Q ss_conf             ---9808888642433789998999999999639999999885045050557658-8213----4122322234789899
Q gi|254780561|r  248 ---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVY----QAIRIPQKSLRFNAEE  319 (338)
Q Consensus       248 ---eG~~~~~~~~~i~k~a~n~~~A~~Fi~flls~e~Q~~~a~~~~~~P~~~~~~-p~~~----~~~~~~~~~~~~~~~~  319 (338)
T Consensus       258 g~~~g~~~i~~~i~ivKga~n~e~AkkfidflLS~e~Q~~~a~~~~~~Pv~~~v~l~~~~~~~~~~~~~~~kl~~~Dw~~  337 (367)
T TIGR03227       258 GEPPSAFAIPYAIGLVKGAPNQDAGKKLIDFLLSADAQAKVPDLSFGIPGRSDVPLSDEHGEAAKAAIAGVKLIPPDWDA  337 (367)
T ss_pred             CCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCHHH
T ss_conf             88873487522034644999989999999997299999999986016767788769835554221332335111589999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999874
Q gi|254780561|r  320 TTRYRNQWISSWQNAVS  336 (338)
Q Consensus       320 ~~~~~~~~~~~W~~~v~  336 (338)
T Consensus       338 i~~~r~~wi~rW~~eV~  354 (367)
T TIGR03227       338 VAAKKPADIERWHKEVI  354 (367)
T ss_pred             HHHHHHHHHHHHHHHHC
T ss_conf             99878999999999857