PSIBLAST alignment of GI: 254780561 and protein with PDB id: 2v84
>gi|158431076|pdb|2V84|A Chain A, Crystal Structure Of The Tp0655 (Tppotd) Lipoprotein Of Treponema Pallidum Length = 343
Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/284 (10%), Positives = 78/284 (27%), Gaps = 27/284 (9%)
Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88
+ VL +Y + + + + FE++ N ++ + + KL + +
Sbjct: 24 QDVLYLYNWTYYTPT-----SLIKKFEQQYNVQVVYDDYASNEDMFAKLSIGASGYDLVV 78
Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQL-------KLPIKWDDDIFVPYDYGYLAFIYDK 141
G +++ S I Q ++ + VPY G +K
Sbjct: 79 PSGDFVSIMKRKHLLEKIDLSKIPNVQFIKESVRARIAYDPKMEYSVPYYLGAAGIAVNK 138
Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK------- 194
+ + + + +++ D +G L + N ++ +
Sbjct: 139 KAVPSYARTWSIFSRKDLAYRMSMMDDMREVMGAALASLGYNVNTKNEQELAQAAILVTD 198
Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQ 253
F G+ ++ + + + + +
Sbjct: 199 HWKPNLVKFDSDGYA--KSFASGDFVVAHGFAEAFFAETPEAMHEHIDFFIPQDVASPVY 256
Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVV 295
++ ++ LA F+ F + P + +P
Sbjct: 257 VDSFCIPKGARNRDLAHAFINFFLEP---AHYAEFLDTFGFPST 297