RPSBLAST alignment for GI: 254780561 and conserved domain: TIGR01276

>gnl|CDD|130343 TIGR01276, thiB, thiamine ABC transporter, periplasmic binding protein. This model finds the thiamine (and thiamine pyrophosphate) ABC transporter periplasmic binding protein ThiB in proteobacteria. Completed genomes having this protein (E. coli, Vibrio cholera, Haemophilus influenzae) also have the permease ThiP, described by TIGRFAMs equivalog model TIGR01253. Length = 309

 Score =  425 bits (1094), Expect = e-120
 Identities = 185/309 (59%), Positives = 241/309 (77%)

Query: 29  KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88
           KPVLTVYTY+SF AD G GP +K+AFE  CNCELKL+ L DGV+LLN+LR+EG+NS AD+
Sbjct: 1   KPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRLEGKNSKADV 60

Query: 89  VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148
           VLG DNNL+D A KTGLFAKS + A  + +P  W++D FVP+DYGY AF+YDK ++  PP
Sbjct: 61  VLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPP 120

Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208
           ++  EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW+
Sbjct: 121 QSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWS 180

Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268
           E+YG FLKGESD VLSY+TSP +++L   +D+Y AA FSEGHYLQ+EVAA+   SKQP+L
Sbjct: 181 EAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPEL 240

Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328
           AQ+F+QF++SP+FQ  +PT NWMYPV ++++P  ++ +  P  +L F   E    R  WI
Sbjct: 241 AQKFLQFLVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAWI 300

Query: 329 SSWQNAVSR 337
           S WQ AVSR
Sbjct: 301 SEWQRAVSR 309