HHsearch alignment for GI: 254780563 and conserved domain: PRK10974
>PRK10974 glycerol-3-phosphate transporter periplasmic binding protein; Provisional.
Probab=98.92 E-value=1.6e-08 Score=68.37 Aligned_cols=143 Identities=16% Similarity=0.217 Sum_probs=78.4
Q ss_pred CCHHHH-HHHHHHHHHHHHHHCCCCCCCCEEEECC---CCHHHHHHHHHHHHHHC-CCCCCCCCHHH----HHHHHHH--
Q ss_conf 902599-9999999999986124445880899818---99899999999999875-98621000013----5667652--
Q gi|254780563|r 1 MFKRTI-YTYLLLLCGFTEAFSTENTTKYLTLYTD---QNQSVMLPIIHSFEERT-GVKISPIYTSS----IQRPPIT-- 69 (195)
Q Consensus 1 mmkk~~-~~~l~l~~~~~~~~~~~~~~~~lvVYs~---~~~~~~~~~~~~Fek~t-gIkV~~~~~~~----~~~~~~~-- 69 (195)
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~a~a~~eI~fWh~~~g~~~~~l~~lv~eFn~~~p~i~V~~~~~g~y~~~l~k~~aa~~ 79 (439)
T PRK10974 1 MFMKSLRSTALGLALGLALSG-NAQAVTEIPFWHSMEGELGKEVDSLAQRFNASQPDYKIVPVYKGNYEQNLAAGIAAFR 79 (439)
T ss_pred CCHHHHHHHHHHHHHHHHHCC-CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf 955789999999999998445-5679769999358998157999999999998785918999865899999999999872
Q ss_pred -HCCCCCEEEECC-HHHHHHHHHHHCCCCCCCCC---C-----CCCC---C-CC-CCC--CCCCCCCCEEEEEEEHHHHC
Q ss_conf -106665575042-23323433100001234222---3-----4720---0-01-222--22344345058887334401
Q gi|254780563|r 70 -QGSPVDVIITKD-ETSLALNEDLLHKLPAHLIK---K-----NSFV---L-KN-ENK--KLMRISFDTQVLAYSTKRIK 132 (195)
Q Consensus 70 -~~~~~d~~~~~d-~~~l~~~~~~l~~~~~~~~~---~-----~~~~---~-~~-~~~--~~~~~~~~~~~~~~n~~~~~ 132 (195)
T Consensus 80 ag~~P-dv~~~~~~~~~~~~~~~~l~pl~~~~~~~~~~~d~~~~~p~~~~~~~~~~~Gk~yglP~~~s~~vlyYNkdlf~ 158 (439)
T PRK10974 80 SGNAP-AILQVYEVGTATMMASKAIKPVYDVFKDAGIPFDESQFVPTVAGYYSDAKTGHLLSQPFNSSTPVLYYNKDAFK 158 (439)
T ss_pred CCCCC-EEEEECCCCHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEHHHHH
T ss_conf 69998-29998743099999769977717989725878785653278887612577986999830377659998589999
Q ss_pred CC-----CCCCCHHHHCC
Q ss_conf 34-----45578888408
Q gi|254780563|r 133 IA-----DLPKSVFDLTN 145 (195)
Q Consensus 133 ~~-----~~P~sw~DL~~ 145 (195)
T Consensus 159 kAGlDp~~pP~TWdEl~~ 176 (439)
T PRK10974 159 KAGLDPEQPPKTWQDLAA 176 (439)
T ss_pred HCCCCCCCCCCCHHHHHH
T ss_conf 769998899999999999