HHsearch alignment for GI: 254780563 and conserved domain: PRK11119

>PRK11119 proX glycine betaine transporter periplasmic subunit; Provisional.
Probab=94.77  E-value=0.3  Score=26.81  Aligned_cols=162  Identities=7%  Similarity=-0.035  Sum_probs=67.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCC---CCCCEEE-ECCC-CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHHCCCC
Q ss_conf             902599999999999998612444---5880899-8189-9899999999999875986210000135667-65210666
Q gi|254780563|r    1 MFKRTIYTYLLLLCGFTEAFSTEN---TTKYLTL-YTDQ-NQSVMLPIIHSFEERTGVKISPIYTSSIQRP-PITQGSPV   74 (195)
Q Consensus         1 mmkk~~~~~l~l~~~~~~~~~~~~---~~~~lvV-Ys~~-~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~-~~~~~~~~   74 (195)
T Consensus         1 ~~~~~~l~~~a~~~~~~~~a~a~~~pg~g~tV~~a~~~W~~~~a~t~v~~~~Le~lGY~Ve~~~~~~~~~~~~ala~Gdi   80 (332)
T PRK11119          1 KMRHKVLLATALATLISTSAFAADLPGKGITVQPAQSTIAEETFQTLLVSRALEKLGYDVNKPKEVDYNVFYTSIASGDA   80 (332)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCCC
T ss_conf             91188899999999852276525589999778760168408999999999999986998542014446889999855884


Q ss_pred             CEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHH------
Q ss_conf             55750422332343310000123422234720001222223443450588873344013445578888408667------
Q gi|254780563|r   75 DVIITKDETSLALNEDLLHKLPAHLIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQW------  148 (195)
Q Consensus        75 d~~~~~d~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~------  148 (195)
T Consensus        81 D~~~~~WlP---~~~~~~~~~~~~~~~-------~~~g~~~~--ga~~G~~V~~~~~-d~~~I~si~dLkdp~~a~~Fd~  147 (332)
T PRK11119         81 TFTAVNWFP---LHDDQYEAAGGDKKF-------YREGVIVG--GAAQGYLIDKKTA-DKYNITNIAQLKDPKIAKLFDT  147 (332)
T ss_pred             EEEECCCCC---CCHHHHHHHCCCCEE-------EECCCCCC--CCCEEEEEECCCC-CCCCCCCHHHHHCHHHHHHCCC
T ss_conf             486556176---517999973277647-------64243356--6513689502332-1148578998628678986076


Q ss_pred             ----CCEEEECCCCCCHHHHHHHHHHHHCHH
Q ss_conf             ----685996289830499999999960869
Q gi|254780563|r  149 ----KKRLSIAPNNISFHRLLNTMEQTPNKT  175 (195)
Q Consensus       149 ----kG~i~~~~~~~s~~~~~~a~~~~~G~~  175 (195)
T Consensus       148 ~~~GKg~i~g~~pGwg~~~~~~~~i~~ygL~  178 (332)
T PRK11119        148 NGDGKADLTGCNPGWGCEAVINHQLKAYGLT  178 (332)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf             7788502881488720668999999867996