HHsearch alignment for GI: 254780563 and conserved domain: TIGR00971
>TIGR00971 3a0106s03 sulfate ABC transporter, sulfate-binding protein; InterPro: IPR005669 Thiosulphate-binding proteins (gene cysP) specifically binds thiosulphate and are involved in the transport systems for this nutrients , . There are two conserved regions in the protein, one located in the N-terminal region and the other in the central part of these proteins. The second pattern includes two adjacent amino acids (Ser-Gly) that, in sbp, are known to be essential for sulphate binding . ; GO: 0015419 sulfate transmembrane-transporting ATPase activity, 0008272 sulfate transport, 0030288 outer membrane-bounded periplasmic space.
Probab=96.68 E-value=0.0057 Score=36.67 Aligned_cols=140 Identities=14% Similarity=0.056 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHHHH----HCC-CCCCCCC--HHH-HHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 98999999999998----759-8621000--013-566765210666557504223323433100001234222347200
Q gi|254780563|r 36 NQSVMLPIIHSFEE----RTG-VKISPIY--TSS-IQRPPITQGSPVDVIITKDETSLALNEDLLHKLPAHLIKKNSFVL 107 (195)
Q Consensus 36 ~~~~~~~~~~~Fek----~tg-IkV~~~~--~~~-~~~~~~~~~~~~d~~~~~d~~~l~~~~~~l~~~~~~~~~~~~~~~ 107 (195)
T Consensus 24 ~RELy~~~N~~F~~~W~~~~GGD~~~i~QSH~gs~KQA~~v~~G~~ADvVT~~~~~DV~~~~~~G~lI~~~W~~rLP~NS 103 (320)
T TIGR00971 24 TRELYEQYNKAFEAHWKKDTGGDKVVIKQSHGGSGKQALSVLNGLEADVVTLALAYDVQILAERGRLIDKDWIKRLPDNS 103 (320)
T ss_pred HHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
T ss_conf 06999871815787566644895478974268860688998700125577888887689998438736546886287878
Q ss_pred CCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHH-------HHHHHHHHHCHH-HHHH
Q ss_conf 01222223443450588873344013445578888408667685996289830499-------999999960869-9999
Q gi|254780563|r 108 KNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHR-------LLNTMEQTPNKT-VVQD 179 (195)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~-------~~~a~~~~~G~~-~~~~ 179 (195)
T Consensus 104 ~-------P-y~ST~~FLV--RKGNPK~-I~DWnDL~~~~v--~~I~PNPK~SG~AR~~YLaAWG~A~~~~~~D~aK~~~ 170 (320)
T TIGR00971 104 A-------P-YTSTIVFLV--RKGNPKQ-IHDWNDLIKPGV--SVITPNPKSSGGARYNYLAAWGYALHADNGDKAKAEQ 170 (320)
T ss_pred C-------C-CCEEEEEEE--ECCCCCC-CCCHHHHHHCCC--EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 8-------6-201335567--5479896-465134633587--5860788986415789999876675137876245899
Q ss_pred HHHHHHHCC
Q ss_conf 999986088
Q gi|254780563|r 180 FIKNITANE 188 (195)
Q Consensus 180 ~l~~l~~N~ 188 (195)
T Consensus 171 F~~~l~KNv 179 (320)
T TIGR00971 171 FVKALLKNV 179 (320)
T ss_pred HHHHHHCCE
T ss_conf 999985010