HHsearch results for GI: 254780563 and protein with PDBid: 1q35_A

>1q35_A Iron binding protein FBPA; metal binding protein; 1.20A {Mannheimia haemolytica} SCOP: c.94.1.1 PDB: 1si0_A 1si1_A
Probab=99.89  E-value=1e-22  Score=148.05  Aligned_cols=166  Identities=20%  Similarity=0.351  Sum_probs=131.7

Q ss_pred             CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHH-HHHCCCCCEEEECCHHHHH--HHHHHHCCCCCCC-
Q ss_conf             88089981899899999999999875986210000135--6676-5210666557504223323--4331000012342-
Q gi|254780563|r   26 TKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSI--QRPP-ITQGSPVDVIITKDETSLA--LNEDLLHKLPAHL-   99 (195)
Q Consensus        26 ~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~--~~~~-~~~~~~~d~~~~~d~~~l~--~~~~~l~~~~~~~-   99 (195)
                      ++||+|||+++++++++++++|||+|||+|+++.+++.  +++. ++.+.++|++++.+...+.  ...+.+.+..... 
T Consensus         1 a~el~vYt~~~~~~~~~li~~Fek~tGIkV~~~~~~~~~~~kl~ae~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~   80 (320)
T 1q35_A            1 ANEVNVYSYRQPYLIEPMLKNFEKDTGIKVNIIFADKGLVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVL   80 (320)
T ss_dssp             CCEEEEEESSCGGGTHHHHHHHHHHHCCEEEEEECC-CCHHHHHHHGGGCCCCEEEESCHHHHHHHHHTTCBCCCCCHHH
T ss_pred             CCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCHHHH
T ss_conf             97589987988768999999998866978999969989999999647999988899797899999885275433421015


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHH-HHHHHHHHHHCHHHHH
Q ss_conf             223472000122222344345058887334401344557888840866768599628983049-9999999960869999
Q gi|254780563|r  100 IKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFH-RLLNTMEQTPNKTVVQ  178 (195)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~-~~~~a~~~~~G~~~~~  178 (195)
                      ...++..+++.+++++++.....++.||+++++....|++|.||++|++++++.+.++..++. .++..+....+.+..+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~yn~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (320)
T 1q35_A           81 EKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVRSGKNSYNVSLFAAMIEHYGIEKTK  160 (320)
T ss_dssp             HHHSCGGGBCTTSSCEEEEEEEEEEEEETTTTCSCCTTCCGGGGGSGGGTTCEECSCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH
T ss_conf             55340443267633762677777888503212357898767775143532862446510455999999999851871267


Q ss_pred             HHHHHHHHCCCCC
Q ss_conf             9999986088705
Q gi|254780563|r  179 DFIKNITANEILT  191 (195)
Q Consensus       179 ~~l~~l~~N~~~~  191 (195)
                      ++++.+.++....
T Consensus       161 ~~~~~~~~~~~~~  173 (320)
T 1q35_A          161 AFLEGLKANLARK  173 (320)
T ss_dssp             HHHHHHHHTBSSC
T ss_pred             HHHHHHHHHHCEE
T ss_conf             8999999751500