HHsearch results for GI: 254780563 and protein with PDBid: 1y9u_A
>1y9u_A Putative iron binding protein; periplasmic binding protein, iron tyrosinate interaction, metal binding protein; 1.39A {Bordetella pertussis tohama I} SCOP: c.94.1.1 PDB: 2ows_A 2owt_A
Probab=99.82 E-value=7.2e-20 Score=131.81 Aligned_cols=158 Identities=16% Similarity=0.296 Sum_probs=110.4
Q ss_pred CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHH-HHCCCCCEEEECCHHHHH-HHHH-HHCCCCC
Q ss_conf 44588089981899899999999999875986210000135--66765-210666557504223323-4331-0000123
Q gi|254780563|r 23 ENTTKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSI--QRPPI-TQGSPVDVIITKDETSLA-LNED-LLHKLPA 97 (195)
Q Consensus 23 ~~~~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~--~~~~~-~~~~~~d~~~~~d~~~l~-~~~~-~l~~~~~ 97 (195)
++.++||||||+++++++++++++|||+|||+|+++.+++. +++.+ ..+.++||+++.+..... ...+ .+.....
T Consensus 2 ~~~a~el~vYs~~~~~~~~~li~~Fek~tGIkV~~~~~~~~~~~kl~ae~~~~~~DV~~~~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 1y9u_A 2 SHMSDEVSLYTTREPKLIQPLLDAFAKDSGIKVNTVFVKDGLLERVRAEGDKSPADVLMTVDIGNLIDLVNGGVTQKIQS 81 (323)
T ss_dssp ----CEEEEEESSCGGGTHHHHHHHHHHHCCEEEEEECSSCHHHHHHHHGGGCCCCEEEEESHHHHHHHHHTTCEECCCC
T ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCC
T ss_conf 65578369997988768999999999866987999979889999999745899987899786789999886045311242
Q ss_pred CCCC-CCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHH--HHHHHHHHHCH
Q ss_conf 4222-34720001222223443450588873344013445578888408667685996289830499--99999996086
Q gi|254780563|r 98 HLIK-KNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHR--LLNTMEQTPNK 174 (195)
Q Consensus 98 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~--~~~a~~~~~G~ 174 (195)
.... ..+...++...++.++.....++.||++.. ..|++|.||++|+|+|++.+..+..+... ++..+....|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~s~~dl~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 158 (323)
T 1y9u_A 82 QTLDSVVPANLRGAEGSWYALSLRDRVLYVEKDLK---LDSFRYGDLADPKWKGKVCIRSGQHPYNTALVAAMIAHDGAE 158 (323)
T ss_dssp HHHHHHSCGGGBCGGGSCEEEEEEEEEEEEETTCC---CCCCBGGGGGCGGGTTCEECCCTTSHHHHHHHHHHHHHHCHH
T ss_pred CCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCC---CCCCCHHCCCCHHHCCCEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 34233441221245653333210234564124557---898741011497775865204677734899999999763150
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780563|r 175 TVVQDFIKN 183 (195)
Q Consensus 175 ~~~~~~l~~ 183 (195)
.....+...
T Consensus 159 ~~~~~~~~~ 167 (323)
T 1y9u_A 159 ATEKWLRGV 167 (323)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 056788877