HHsearch results for GI: 254780563 and protein with PDBid: 2nvu_B

>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.02  E-value=2.6e-09  Score=71.59  Aligned_cols=167  Identities=14%  Similarity=0.145  Sum_probs=100.6

Q ss_pred             CCCCCCEEEECCCC--HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---HHHCCCCCEEEECCH-HHHHHHHHHHCCCC
Q ss_conf             44588089981899--8999999999998759862100001356676---521066655750422-33234331000012
Q gi|254780563|r   23 ENTTKYLTLYTDQN--QSVMLPIIHSFEERTGVKISPIYTSSIQRPP---ITQGSPVDVIITKDE-TSLALNEDLLHKLP   96 (195)
Q Consensus        23 ~~~~~~lvVYs~~~--~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~---~~~~~~~d~~~~~d~-~~l~~~~~~l~~~~   96 (195)
                      +..+++|+|+.+.+  .+.+++++++||+++||+|+++..+.....+   ...++..|+++.... ...+...|++.+++
T Consensus         5 k~eeg~ltvW~~~~~~~~~~~~~~~~Fe~~tgIkV~~~~~~d~~~kl~~~~asG~~PDvi~~~~~~~~~~~~~G~l~~L~   84 (805)
T 2nvu_B            5 KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT   84 (805)
T ss_dssp             CCCTTSEEEECCTTSCSHHHHHHHHHHHHHHSCCEEEECCTTHHHHHHHHHHSSCSCSEEEEEHHHHHHHHHTTCBCCCC
T ss_pred             CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCEEECC
T ss_conf             88888799996698338999999999853609589998389899999999866998869999979999999887986799


Q ss_pred             CCCC--CCCCCCCC---CCCCCC--CCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCH----HHCCEEEECCCCCCHHHHH
Q ss_conf             3422--23472000---122222--34434505888733440134455788884086----6768599628983049999
Q gi|254780563|r   97 AHLI--KKNSFVLK---NENKKL--MRISFDTQVLAYSTKRIKIADLPKSVFDLTNA----QWKKRLSIAPNNISFHRLL  165 (195)
Q Consensus        97 ~~~~--~~~~~~~~---~~~~~~--~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p----~~kG~i~~~~~~~s~~~~~  165 (195)
                      ....  +...+...   ..+|..  +|+...+.++.||++.+.  ++|+||+||.+-    +-+|+..+.-+........
T Consensus        85 ~~~~~~~~~~~~~~~~~~~dGk~ygvP~~~~~~~l~Ynkdl~~--eaP~Twdel~~~ak~l~~~g~~~~~~~~~~~~~~~  162 (805)
T 2nvu_B           85 PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLP--NPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTW  162 (805)
T ss_dssp             CCHHHHTSBCTTHHHHTEETTEECEEEEEEEECEEEECTTTCS--SCCSBSTTHHHHHHHHHTTTCEEECCCCSSHHHHH
T ss_pred             CCHHHHHHCCHHHHHHCEECCEEEEEEEECCEEEEEEEHHHHC--CCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
T ss_conf             4754365578988974589998999998753679999908834--89999999999999998669863896168628999


Q ss_pred             HHHHHHHC---------------------HHHHHHHHHHHHHCCCCC
Q ss_conf             99999608---------------------699999999986088705
Q gi|254780563|r  166 NTMEQTPN---------------------KTVVQDFIKNITANEILT  191 (195)
Q Consensus       166 ~a~~~~~G---------------------~~~~~~~l~~l~~N~~~~  191 (195)
                      ..+.+..|                     ...+.+|++.|..++...
T Consensus       163 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  209 (805)
T 2nvu_B          163 PLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMN  209 (805)
T ss_dssp             HHHHHTTCEEEEECSSSEEEEEEETSSHHHHHHHHHHHHHHHSSSCC
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf             99998477402445443444433458888999999999999759988