HHsearch results for GI: 254780563 and protein with PDBid: 2qry_A
>2qry_A Thiamine-binding periplasmic protein; thiamin binding protein, ABC transporter, transport protein; HET: TPS; 2.25A {Escherichia coli}
Probab=99.91 E-value=1.7e-24 Score=158.26 Aligned_cols=175 Identities=15% Similarity=0.134 Sum_probs=125.5
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCCCHHH----HHHHHHHHHHHCCCCCCCCCHH-HHHH---HHH-HHCCCCCEEEECCH
Q ss_conf 9999998612444588089981899899----9999999998759862100001-3566---765-21066655750422
Q gi|254780563|r 12 LLCGFTEAFSTENTTKYLTLYTDQNQSV----MLPIIHSFEERTGVKISPIYTS-SIQR---PPI-TQGSPVDVIITKDE 82 (195)
Q Consensus 12 l~~~~~~~~~~~~~~~~lvVYs~~~~~~----~~~~~~~Fek~tgIkV~~~~~~-~~~~---~~~-~~~~~~d~~~~~d~ 82 (195)
+..+..+.+++.+.+++|+||++.++.. .+.++++||++|||+|+++..+ +.+. +.. .++.++|++++.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~l~Vy~~~~~~~~~~~~~~i~~~FE~~~gi~V~~~~~~s~~~ll~kl~~e~~~~~~DVv~~~~~ 87 (330)
T 2qry_A 8 HHHSSGLVPRGSHMKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDN 87 (330)
T ss_dssp --------------CCEEEEEECHHHHSTTSSHHHHHHHHHTTSCSEEEEEECSCHHHHHHHHHHHGGGCCCSEEEEEEG
T ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCH
T ss_conf 34234566556567987999978765535577779999999987978999958998999999997279998329997567
Q ss_pred HHH--HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCC
Q ss_conf 332--343310000123422234720001222223443450588873344013445578888408667685996289830
Q gi|254780563|r 83 TSL--ALNEDLLHKLPAHLIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNIS 160 (195)
Q Consensus 83 ~~l--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s 160 (195)
..+ ....+++.++..+...... .....+++++++.....+++||++.+. ++|+||+||++|+|+|||+++++..+
T Consensus 88 ~~~~~~~~~gl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~yn~~~~~--~~p~s~~dL~~p~~~gki~~~~~~~~ 164 (330)
T 2qry_A 88 NLLDAASKTGLFAKSGVAADAVNV-PGGWNNDTFVPFDYGYFAFVYDKNKLK--NPPQSLKELVESDQNWRVIYQDPRTS 164 (330)
T ss_dssp GGHHHHHHHTCBCCCCCCGGGCCC-TTCCCCSSCEEEEEEEEEEEEETTTCS--SCCSSHHHHHHCSSCCCEEEECTTTC
T ss_pred HHHHHHHHCCCCCCCCCCHHHHCC-CHHHCCCCEEEECCCEEEEEECCCCCC--CCCCCHHHHHHCCCCCEEEECCCCCC
T ss_conf 789999874752124576333036-423236650320452478874332256--89977899851402412574277534
Q ss_pred --HHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
Q ss_conf --499999999960869999999998608870
Q gi|254780563|r 161 --FHRLLNTMEQTPNKTVVQDFIKNITANEIL 190 (195)
Q Consensus 161 --~~~~~~a~~~~~G~~~~~~~l~~l~~N~~~ 190 (195)
+..++.++...+|++ ++++|++++.|+..
T Consensus 165 ~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 195 (330)
T 2qry_A 165 TPGLGLLLWMQKVYGDD-APQAWQKLAKKTVT 195 (330)
T ss_dssp HHHHHHHHHHHHHHGGG-HHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHHCCCH-HHHHHHHHHHHCCC
T ss_conf 77899999999857956-99999999872676