HHsearch results for GI: 254780563 and protein with PDBid: 2v25_A
>2v25_A Major cell-binding factor; antigen, adhesin, aspartate, glutamate, transport, ABC transport, virulence factor, receptor; 1.49A {Campylobacter jejuni}
Probab=96.56 E-value=0.013 Score=33.42 Aligned_cols=80 Identities=18% Similarity=0.295 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCC----------CCEEEE-C----CC---------CHHHHHHHHHHHHHHC---CC
Q ss_conf 90259999999999999861244458----------808998-1----89---------9899999999999875---98
Q gi|254780563|r 1 MFKRTIYTYLLLLCGFTEAFSTENTT----------KYLTLY-T----DQ---------NQSVMLPIIHSFEERT---GV 53 (195)
Q Consensus 1 mmkk~~~~~l~l~~~~~~~~~~~~~~----------~~lvVY-s----~~---------~~~~~~~~~~~Fek~t---gI 53 (195)
||||.++..+++++++++++++...+ ++|+|- . +. .....-.+.+++.++. ++
T Consensus 2 ~~~k~l~~~~~~~l~~~~~~~~~~~a~~~l~~i~~~~~l~V~~~~~~pP~~~~d~~~g~~~G~~~di~~~ia~~~~~~~~ 81 (259)
T 2v25_A 2 VFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDK 81 (259)
T ss_dssp ---------------------------CHHHHHHHHTCEEEEECSEETTTEEEETTTTEEESHHHHHHHHHHHHHHSCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCEEEECCCCEEEEEEEHHHHHHHHHHCCCCC
T ss_conf 63799999999999999872331113265999960998999982897883246678984888986476568887278875
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 621000013566765210666557504
Q gi|254780563|r 54 KISPIYTSSIQRPPITQGSPVDVIITK 80 (195)
Q Consensus 54 kV~~~~~~~~~~~~~~~~~~~d~~~~~ 80 (195)
+|+++................|+.+..
T Consensus 82 ~v~~~~~~~~~~~~~l~~g~~d~~~~~ 108 (259)
T 2v25_A 82 KIKLVAVNAKTRGPLLDNGSVDAVIAT 108 (259)
T ss_dssp SEEEEECCTTTHHHHHHTTSCSEECSS
T ss_pred EEEEEEEEHHHHHHHHHCCCCCCCCCC
T ss_conf 799998337758999976996600333