HHsearch results for GI: 254780563 and protein with PDBid: 3e13_X
>3e13_X Putative iron-uptake ABC transport system, periplasmic iron-binding protein; beta sheet surrounded by alpha helices; 1.60A {Campylobacter jejuni} PDB: 1y4t_A
Probab=99.90 E-value=1.9e-23 Score=152.18 Aligned_cols=167 Identities=20% Similarity=0.311 Sum_probs=135.0
Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---H-HHHCCCCCEEEECCHHHHH--HHHHHHCCCCCCC
Q ss_conf 88089981899899999999999875986210000135667---6-5210666557504223323--4331000012342
Q gi|254780563|r 26 TKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRP---P-ITQGSPVDVIITKDETSLA--LNEDLLHKLPAHL 99 (195)
Q Consensus 26 ~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~---~-~~~~~~~d~~~~~d~~~l~--~~~~~l~~~~~~~ 99 (195)
++||+|||+.++...++++++|||+|||+|+++..++.+.. . ++.+.++|++++.+..... ...+.+.+++...
T Consensus 1 ~~ev~vy~~~~~~~~~~l~~~Fek~tGIkV~~~~~~s~~~~~kl~ae~~~~~~DVv~~~~~~~~~~~~~~~~~~~~~~~~ 80 (322)
T 3e13_X 1 ASELNIYSARHYNADFEIIKKFEEKTGIKVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKY 80 (322)
T ss_dssp -CEEEEEECCCCTHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHGGGCCCCEEEESCHHHHHHHHHTTCEECCCCHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCC
T ss_conf 97589987988552699999999976988999989819999999964789996399958699999998656656456621
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCC-HHHHHHHHHHHHCHHHH
Q ss_conf 223-4720001222223443450588873344013445578888408667685996289830-49999999996086999
Q gi|254780563|r 100 IKK-NSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNIS-FHRLLNTMEQTPNKTVV 177 (195)
Q Consensus 100 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s-~~~~~~a~~~~~G~~~~ 177 (195)
..+ ++...++.+++++++.....+++||++......+|++|+||++|.++|++++++.+++ +..++.++....|++..
T Consensus 81 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~n~~~~~~~~~p~tw~dL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 160 (322)
T 3e13_X 81 LEEFIPAHLRDKDKEWFAITKRARIIAYNKNTNIDISKMKNYEDLAKAEFKGEIVMRSATAPYSKTLLASIIANDGNKEA 160 (322)
T ss_dssp HHHHSCGGGBCTTSSCEEEEEEEEEEEEETTSCCCCTTCCSGGGGGSGGGTTCEECCCTTSHHHHHHHHHHHHHHCHHHH
T ss_pred HHHCCCHHCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
T ss_conf 33315201037775246552230578751333345789999999841875387134772013678899999863286017
Q ss_pred HHHHHHHHHCCCCCC
Q ss_conf 999999860887056
Q gi|254780563|r 178 QDFIKNITANEILTK 192 (195)
Q Consensus 178 ~~~l~~l~~N~~~~~ 192 (195)
.++++.+..|....+
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (322)
T 3e13_X 161 KAWAKGVLENLATNP 175 (322)
T ss_dssp HHHHHHHHHHBSSSC
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999998876403355