HHsearch results for GI: 254780563 and protein with PDBid: 3muq_A
>3muq_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.05A {Vibrio parahaemolyticus}
Probab=99.03 E-value=4.1e-10 Score=76.13 Aligned_cols=133 Identities=16% Similarity=0.100 Sum_probs=83.3
Q ss_pred CCCCCEEEECC--CCH-HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHH--HHHHHCCCCCC
Q ss_conf 45880899818--998-99999999999875986210000135667652106665575042233234--33100001234
Q gi|254780563|r 24 NTTKYLTLYTD--QNQ-SVMLPIIHSFEERTGVKISPIYTSSIQRPPITQGSPVDVIITKDETSLAL--NEDLLHKLPAH 98 (195)
Q Consensus 24 ~~~~~lvVYs~--~~~-~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~~~~~~d~~~~~d~~~l~~--~~~~l~~~~~~ 98 (195)
+.++.++|++. ..+ .+++++.++|||+|||+|+++.+++.+.+.+.++.++|++++.+...... +.+.+.+..
T Consensus 2 ~~a~~~~~~~~~S~~~sgl~~~l~~~Fek~tGi~V~~~~g~sg~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-- 79 (237)
T 3muq_A 2 NAAEHVRLATTTSTYHSGLLDYLLPQFEKDTGYKVDVIAAGTGKALKMGENGDVDLVMTHAPKAEGTFVEKGYGVLPR-- 79 (237)
T ss_dssp ---CEEEEEEEHHHHHHTHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHTTSSSEEEECCHHHHHHHHHTTSEEEEE--
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCC--
T ss_conf 978727999975874022799999999998598799997784999999866898758851717789887547765552--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHH--HHHHHHHHHCH
Q ss_conf 22234720001222223443450588873344013445578888408667685996289830499--99999996086
Q gi|254780563|r 99 LIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHR--LLNTMEQTPNK 174 (195)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~--~~~a~~~~~G~ 174 (195)
..............+.......+..|.++.++.++++++++++.+++.. ....+....++
T Consensus 80 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 141 (237)
T 3muq_A 80 ----------------KLMYNDFVIVGPKADPAKIKDDESVLDVFKEIANKNATFISRGDDSGTHKKEMGFWAQTKIE 141 (237)
T ss_dssp ----------------EEEEEEEEEEECTTCTTCCTTCSSHHHHHHHHHHTTCCEEECCSCCHHHHHHHHHHHHHTCC
T ss_pred ----------------EEEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
T ss_conf ----------------34541002787614631123451256665411245427987776637899999999872565