HHsearch results for GI: 254780563 and protein with PDBid: 3o3u_N
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3cjj_A 2e5e_A
Probab=98.95 E-value=1.1e-08 Score=68.12 Aligned_cols=166 Identities=14% Similarity=0.143 Sum_probs=97.4
Q ss_pred CCCCEEEECC--CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---HHCCCCCEEEECC-HHHHHHHHHHHCCCCCC
Q ss_conf 5880899818--9989999999999987598621000013566765---2106665575042-23323433100001234
Q gi|254780563|r 25 TTKYLTLYTD--QNQSVMLPIIHSFEERTGVKISPIYTSSIQRPPI---TQGSPVDVIITKD-ETSLALNEDLLHKLPAH 98 (195)
Q Consensus 25 ~~~~lvVYs~--~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~---~~~~~~d~~~~~d-~~~l~~~~~~l~~~~~~ 98 (195)
++++|+|+.. ...+.+++++++||+++||+|+++..+.....+. ..++..|++.... ....+...|++.++...
T Consensus 3 e~g~ltvW~~~~~~~~~l~~~~~~Fe~~~gI~V~~~~~~~~~~kl~~~~~sG~~PDv~~~~~~~~~~~~~~g~l~~L~~~ 82 (581)
T 3o3u_N 3 EEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPD 82 (581)
T ss_dssp CTTEEEEECCTTSCHHHHHHHHHHHHHHHCCEEEEECCTTHHHHHHHHHTTTCSCSEEEEEGGGHHHHHHTTCBCCCCCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCEEECCCC
T ss_conf 42399999789823899999999862252948999958879999999986799886999990899999988896258946
Q ss_pred CC--CCCCCCC---CCCCCC--CCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCC--HHH--CCEEEECCCCCCHHHHHHH
Q ss_conf 22--2347200---012222--23443450588873344013445578888408--667--6859962898304999999
Q gi|254780563|r 99 LI--KKNSFVL---KNENKK--LMRISFDTQVLAYSTKRIKIADLPKSVFDLTN--AQW--KKRLSIAPNNISFHRLLNT 167 (195)
Q Consensus 99 ~~--~~~~~~~---~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~--p~~--kG~i~~~~~~~s~~~~~~a 167 (195)
.. +...+.. ...+|. .+|......++.||++.++ ++|++|+||.+ .+. +|...+.-.......+...
T Consensus 83 ~~~~d~~~~~~~~~~~~dG~~ygiP~~~~~~~l~ynkdl~~--e~P~Twdel~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 160 (581)
T 3o3u_N 83 KAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLP--NPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL 160 (581)
T ss_dssp HHHHTTBCHHHHHHTEETTEECSEEEEEECCEEEEETTTCS--SCCSBGGGHHHHHHHHHTTTCEEECCCCSSHHHHHHH
T ss_pred HHHHHHCCHHHHHHCEECCEEEEEEEECCEEEEEEECCCCC--CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 34354558886863189999999999731479999872255--8997578877755433125877632577753001356
Q ss_pred HHHHHC---------------------HHHHHHHHHHHHHCCCCCC
Q ss_conf 999608---------------------6999999999860887056
Q gi|254780563|r 168 MEQTPN---------------------KTVVQDFIKNITANEILTK 192 (195)
Q Consensus 168 ~~~~~G---------------------~~~~~~~l~~l~~N~~~~~ 192 (195)
+.+..| ..++.+|++.|..++...+
T Consensus 161 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~l~~~~~~~~ 206 (581)
T 3o3u_N 161 IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA 206 (581)
T ss_dssp HHHTTCEEEEEETTEEEEEEEESSSHHHHHHHHHHHHHHHTTSSCT
T ss_pred HHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 7641771102345665445445477889999999999997389888