HHSEARCH alignment of GI: 254780563 and SCOP domain: d1amfa_

Alignment

Probab=99.25  E-value=1e-11  Score=83.89  Aligned_cols=130  Identities=14%  Similarity=0.150  Sum_probs=75.8

Q ss_pred             CCEEEECCCC-HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-CCCCCEEEECCHHHHHHH--HHHHCCCCCCCCCC
Q ss_conf             8089981899-8999999999998759862100001356676521-066655750422332343--31000012342223
Q gi|254780563|r   27 KYLTLYTDQN-QSVMLPIIHSFEERTGVKISPIYTSSIQRPPITQ-GSPVDVIITKDETSLALN--EDLLHKLPAHLIKK  102 (195)
Q Consensus        27 ~~lvVYs~~~-~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~~-~~~~d~~~~~d~~~l~~~--~~~l~~~~~~~~~~  102 (195)
                      +||+||++.+ ...+++++++|||+|||+|+++.+++.+.+.+.+ +..+|+++..+.......  .+...         
T Consensus         1 Gel~vy~a~s~~~~~~~l~~~Fek~~gi~V~~~~~~sg~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   71 (231)
T d1amfa_           1 GKITVFAAASLTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAID---------   71 (231)
T ss_dssp             CEEEEEEEGGGHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHTCCCSEEECSSHHHHHHHHHTTCBC---------
T ss_pred             CEEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCC---------
T ss_conf             98999997471999999999998821987999978829999999838986699966334568988605667---------


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCC---CCCHHHHCCHHHCCEEEECCCCCCHH-HHHHHHHHHHCHHH
Q ss_conf             4720001222223443450588873344013445---57888840866768599628983049-99999999608699
Q gi|254780563|r  103 NSFVLKNENKKLMRISFDTQVLAYSTKRIKIADL---PKSVFDLTNAQWKKRLSIAPNNISFH-RLLNTMEQTPNKTV  176 (195)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~---P~sw~DL~~p~~kG~i~~~~~~~s~~-~~~~a~~~~~G~~~  176 (195)
                             .. .+.........+.++.........   |++|.||   .++|++++.++..+.. ..........|+..
T Consensus        72 -------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (231)
T d1amfa_          72 -------TA-TRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSL---LNGGRLAVGDPEHVPAGIYAKEALQKLGAWD  138 (231)
T ss_dssp             -------GG-GCEEEEEECEEEEEETTCCCCCCCCSTTCCHHHH---HTTCCEEEECTTTCHHHHHHHHHHHHTTCHH
T ss_pred             -------CC-CCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHH---CCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
T ss_conf             -------66-5123204541122101222342323357789861---0799689988987338999999888717730

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Molybdate-binding protein, ModA
species: Escherichia coli [TaxId: 562]