HHSEARCH alignment of GI: 254780563 and SCOP domain: d1atga_

Alignment
>d1atga_ c.94.1.1 (A:) Molybdate-binding protein, ModA {Azotobacter vinelandii [TaxId: 354]}
Probab=99.00  E-value=1.2e-09  Score=72.04  Aligned_cols=124  Identities=16%  Similarity=0.116  Sum_probs=73.5

Q ss_pred             CEEEECCCC-HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-HCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             089981899-899999999999875986210000135667652-106665575042233234331000012342223472
Q gi|254780563|r   28 YLTLYTDQN-QSVMLPIIHSFEERTGVKISPIYTSSIQRPPIT-QGSPVDVIITKDETSLALNEDLLHKLPAHLIKKNSF  105 (195)
Q Consensus        28 ~lvVYs~~~-~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~-~~~~~d~~~~~d~~~l~~~~~~l~~~~~~~~~~~~~  105 (195)
                      ||+|+++.+ ...++++.++||++|||+|+++.+++.+.+.+. ++.++|+++..+............            
T Consensus         1 el~v~~~~~~~~~~~~l~~~Fe~~tGi~V~~~~g~s~~l~~~i~~g~~~dv~~~~~~~~~~~~~~~~~------------   68 (231)
T d1atga_           1 ELKVVTATNFLGTLEQLAGQFAKQTGHAVVISSGSSGPVYAQIVNGAPYNVFFSADEKSPEKLDNQGF------------   68 (231)
T ss_dssp             CEEEEEEGGGHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHTTCCCSEEECSSSHHHHHHHHTTC------------
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCC------------
T ss_conf             97999950469999999999999649789999777699999998289886687510466666564013------------


Q ss_pred             CCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCC--CHHHHHHHHHHH
Q ss_conf             000122222344345058887334401344557888840866768599628983--049999999996
Q gi|254780563|r  106 VLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNI--SFHRLLNTMEQT  171 (195)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~--s~~~~~~a~~~~  171 (195)
                         .....+.....  ..+++...  .....|++|+||++|+|++ +++++++.  ++......+...
T Consensus        69 ---~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~l~~~~~~~-i~~~~p~~~~~g~~~~~~~~~~  128 (231)
T d1atga_          69 ---ALPGSRFTYAI--GKLVLWSA--KPGLVDNQGKVLAGNGWRH-IAISNPQIAPYGLAGTQVLTHL  128 (231)
T ss_dssp             ---BCTTCCEEEEE--CCEEEEES--STTTSCTTSGGGGSSSCSC-EEEECTTTCHHHHHHHHHHHHT
T ss_pred             ---CCCCCCCEECC--CCEEEECC--CCCCCCCCHHHHCCCCCCE-EEEECCCCCHHHHHHHHHHHHH
T ss_conf             ---22231000014--52000003--5777897688835743577-9995676561468998765400


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Molybdate-binding protein, ModA
species: Azotobacter vinelandii [TaxId: 354]