HHSEARCH alignment of GI: 254780563 and SCOP domain: d1eu8a_

Alignment
>d1eu8a_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=98.23  E-value=4.5e-06  Score=51.74  Aligned_cols=120  Identities=13%  Similarity=0.123  Sum_probs=69.8

Q ss_pred             CCCEEEECCCCH---HHHHHHHHHHHHHC-CCCCCCCCHH--HHH----HH--HHHHCCCCCEEEECC-HHHHHHHHHHH
Q ss_conf             880899818998---99999999999875-9862100001--356----67--652106665575042-23323433100
Q gi|254780563|r   26 TKYLTLYTDQNQ---SVMLPIIHSFEERT-GVKISPIYTS--SIQ----RP--PITQGSPVDVIITKD-ETSLALNEDLL   92 (195)
Q Consensus        26 ~~~lvVYs~~~~---~~~~~~~~~Fek~t-gIkV~~~~~~--~~~----~~--~~~~~~~~d~~~~~d-~~~l~~~~~~l   92 (195)
                      ++++|+-.+...   +..+.++++|++++ ||+|+++...  ..+    .+  +...+...|+++... ........|++
T Consensus         3 ~g~i~~~~~g~p~~~~~~~~~i~~F~~~~p~i~V~~~~~~~~~~~~~~~~~~~~~a~g~~PDi~~~~~~~~~~~~~~g~l   82 (407)
T d1eu8a_           3 EGKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASGWL   82 (407)
T ss_dssp             SSEEEEEECCSHHHHHHHHHHHHHHHHHSTTCEEEEEECCSSHHHHHHHHHHHHTTTCSSEEEEEEETTTHHHHHHHTCB
T ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCC
T ss_conf             42699997897669999999999999888691899997368459999999999982899987999894889999987993


Q ss_pred             CCCCCCC------CC-CCCC---CCCCCCC--CCCCCCCCEEEEEEEHHHHCCC---CCCCCHHHHCC
Q ss_conf             0012342------22-3472---0001222--2234434505888733440134---45578888408
Q gi|254780563|r   93 HKLPAHL------IK-KNSF---VLKNENK--KLMRISFDTQVLAYSTKRIKIA---DLPKSVFDLTN  145 (195)
Q Consensus        93 ~~~~~~~------~~-~~~~---~~~~~~~--~~~~~~~~~~~~~~n~~~~~~~---~~P~sw~DL~~  145 (195)
                      .++..-.      .. ..+.   .....+|  +.+|......++.||++.++..   .+|++|+||.+
T Consensus        83 ~dL~~~~~~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~~~yNkdl~~~~G~~~p~~T~de~~~  150 (407)
T d1eu8a_          83 EPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVE  150 (407)
T ss_dssp             CCSHHHHHHHTCCGGGBCHHHHHHHTEETTEECCEEEEEEECEEEEEHHHHHHTTCCSCCSBHHHHHH
T ss_pred             CCCCHHHHHCCHHHHHHCHHHHHHHHCCCCEEECCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHH
T ss_conf             33857655311325540488998751345423027630123455416125554215798889999999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: D-maltodextrin-binding protein, MBP
species: Archaeon Thermococcus litoralis [TaxId: 2265]