Query gi|254780563|ref|YP_003064976.1| extracellular solute-binding protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 195
No_of_seqs 106 out of 2115
Neff 9.0
Searched_HMMs 13730
Date Wed Jun 1 09:20:20 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780563.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xvxa_ c.94.1.1 (A:) Ferric-b 100.0 3.7E-30 2.7E-34 189.2 14.0 164 25-188 2-171 (311)
2 d1q35a_ c.94.1.1 (A:) Ferric-b 100.0 7.2E-29 5.3E-33 181.8 13.2 167 26-192 1-174 (318)
3 d1nnfa_ c.94.1.1 (A:) Ferric-b 99.9 3.3E-25 2.4E-29 160.9 14.0 163 28-190 1-171 (308)
4 d1y4ta_ c.94.1.1 (A:) Ferric-b 99.9 1E-23 7.3E-28 152.4 13.5 165 27-191 1-173 (317)
5 d1y9ua_ c.94.1.1 (A:) Ferric-b 99.8 1.5E-20 1.1E-24 134.3 12.5 158 27-187 1-165 (318)
6 d1pota_ c.94.1.1 (A:) Spermidi 99.7 1.2E-17 8.6E-22 117.8 6.0 160 26-187 1-180 (322)
7 d1sbpa_ c.94.1.1 (A:) Sulphate 99.4 7.2E-13 5.2E-17 90.5 11.2 149 28-190 4-168 (309)
8 d1amfa_ c.94.1.1 (A:) Molybdat 99.2 1E-11 7.6E-16 83.9 8.0 130 27-176 1-138 (231)
9 d1a99a_ c.94.1.1 (A:) Putresci 99.2 7.1E-12 5.2E-16 84.8 5.3 162 26-188 1-193 (341)
10 d1atga_ c.94.1.1 (A:) Molybdat 99.0 1.2E-09 9.1E-14 72.0 9.3 124 28-171 1-128 (231)
11 d1laxa_ c.94.1.1 (A:) D-maltod 98.9 1.2E-08 8.9E-13 66.4 10.6 167 24-192 2-206 (369)
12 d1elja_ c.94.1.1 (A:) D-maltod 98.7 3.7E-08 2.7E-12 63.7 7.4 121 23-145 2-139 (380)
13 d1ursa_ c.94.1.1 (A:) D-maltod 98.6 2.1E-07 1.5E-11 59.4 10.8 162 27-190 1-199 (367)
14 d1eu8a_ c.94.1.1 (A:) D-maltod 98.2 4.5E-06 3.3E-10 51.7 9.3 120 26-145 3-150 (407)
15 d3thia_ c.94.1.1 (A:) Thiamina 97.9 5.8E-06 4.2E-10 51.1 4.8 114 29-145 5-133 (362)
16 d2onsa1 c.94.1.1 (A:32-342) Mo 97.6 6.3E-05 4.6E-09 45.2 5.7 71 28-98 3-79 (311)
17 d1twya_ c.94.1.1 (A:) ABC tran 97.3 0.0008 5.8E-08 38.9 8.7 122 28-169 2-136 (249)
18 d1j1na_ c.94.1.1 (A:) Alginate 97.3 4.2E-05 3.1E-09 46.2 1.6 120 25-145 9-162 (492)
19 d1p99a_ c.94.1.1 (A:) Putative 90.2 0.48 3.5E-05 23.1 8.7 56 28-84 1-58 (255)
20 d2fyia1 c.94.1.1 (A:88-307) Ly 86.4 0.86 6.3E-05 21.6 8.5 57 25-81 4-63 (220)
21 d1xs5a_ c.94.1.1 (A:) Putative 84.3 1.1 8E-05 21.0 9.3 58 26-83 2-61 (240)
22 d1ixha_ c.94.1.1 (A:) Phosphat 70.8 2.8 0.00021 18.7 8.8 49 28-76 3-52 (321)
23 d1utha_ c.94.1.1 (A:) LysR-typ 64.1 3.9 0.00028 17.9 4.7 61 22-82 7-70 (219)
24 d2esna2 c.94.1.1 (A:92-303) Pr 62.9 4.1 0.0003 17.7 4.1 59 23-81 4-65 (212)
25 d1pc3a_ c.94.1.1 (A:) Phosphat 60.9 4.5 0.00033 17.5 8.0 54 23-76 6-61 (333)
26 d2v3qa1 c.94.1.1 (A:1-376) Pst 46.6 3.7 0.00027 18.0 1.4 25 40-64 10-34 (376)
27 d1ixca2 c.94.1.1 (A:90-294) Ly 46.5 7.8 0.00057 16.2 3.6 53 28-80 3-58 (205)
28 d1gc0a_ c.67.1.3 (A:) Methioni 40.5 9.7 0.00071 15.6 3.9 54 25-78 96-149 (392)
29 d1y4ia1 c.67.1.3 (A:2-398) Met 35.7 12 0.00085 15.2 5.3 54 25-78 100-153 (397)
30 d1itwa_ c.77.1.2 (A:) Monomeri 30.5 14 0.001 14.7 3.9 33 29-61 4-42 (740)
31 d1al3a_ c.94.1.1 (A:) Cofactor 29.8 15 0.0011 14.6 8.7 56 25-80 4-62 (237)
32 d1a9xb1 c.8.3.1 (B:1502-1652) 24.0 16 0.0012 14.4 1.6 24 124-154 29-53 (151)
33 d1w6ua_ c.2.1.2 (A:) 2,4-dieno 21.4 19 0.0014 13.9 1.6 29 31-59 53-81 (294)
34 d1pffa_ c.67.1.3 (A:) Methioni 21.1 22 0.0016 13.6 5.1 45 25-69 35-79 (331)
No 1
>d1xvxa_ c.94.1.1 (A:) Ferric-binding protein FbpA {Yersinia enterocolitica, YfuA [TaxId: 630]}
Probab=99.97 E-value=3.7e-30 Score=189.15 Aligned_cols=164 Identities=21% Similarity=0.397 Sum_probs=145.3
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HH-HHCCCCCEEEECCHHHH--HHHHHHHCCCCCC
Q ss_conf 588089981899899999999999875986210000135667---65-21066655750422332--3433100001234
Q gi|254780563|r 25 TTKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRP---PI-TQGSPVDVIITKDETSL--ALNEDLLHKLPAH 98 (195)
Q Consensus 25 ~~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~---~~-~~~~~~d~~~~~d~~~l--~~~~~~l~~~~~~ 98 (195)
.+++|||||+++++.+++++++|||+|||+|+++.+++.+.. .. +.++++|++++.+...+ ....+++.++.+.
T Consensus 2 ~~~~lvvYs~~~~~~~~~ii~~Fek~tGI~V~~~~~~s~~l~~ki~aeg~~~~~Dv~~~~d~~~~~~~~~~~l~~~~~~~ 81 (311)
T d1xvxa_ 2 NDSGIVVYNAQHENLVKSWVDGFTKDTGIKVTLRNGGDSELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAV 81 (311)
T ss_dssp CCSCEEEEECSCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHGGGCCCSEEEESSSHHHHHHHHTTCBCCCCHH
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCC
T ss_conf 99709999798877999999999886698899998985999999997478999878997878999988755862222333
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHHHHHHHHHHHCHHHHH
Q ss_conf 22234720001222223443450588873344013445578888408667685996289830499999999960869999
Q gi|254780563|r 99 LIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHRLLNTMEQTPNKTVVQ 178 (195)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~~~~a~~~~~G~~~~~ 178 (195)
...++++.+++++++|+++.....+++||++.++..++|++|+||++|+|||++++++++.++..+...+....|.+.++
T Consensus 82 ~~~~i~~~~~d~~~~~~~~~~~~~~i~yn~~~~~~~~~P~t~~dl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 161 (311)
T d1xvxa_ 82 TQAQVAQEYRPEHGRWTGIAARSTVFVYNPEKISEAELPKSIMDLAKPEWKGRWAASPSGADFQAIVSAMLELKGEKATL 161 (311)
T ss_dssp HHHHBCGGGSCSSSSCEEEEEEEEEEEECTTTSCGGGSCSSGGGGGSGGGTTSEEECTTSHHHHHHHHHHHHHHCHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECEEEEEEECCCCCCCCCCCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 32235521003478122210032899986110454569855776426022023222112557999999999841827789
Q ss_pred HHHHHHHHCC
Q ss_conf 9999986088
Q gi|254780563|r 179 DFIKNITANE 188 (195)
Q Consensus 179 ~~l~~l~~N~ 188 (195)
+|+++|+.|.
T Consensus 162 ~~~~~l~~~~ 171 (311)
T d1xvxa_ 162 EWLKAMKTNF 171 (311)
T ss_dssp HHHHHHHHHE
T ss_pred HHHHHHHCCC
T ss_conf 9998751254
No 2
>d1q35a_ c.94.1.1 (A:) Ferric-binding protein FbpA {Mannheimia haemolytica [TaxId: 75985]}
Probab=99.96 E-value=7.2e-29 Score=181.76 Aligned_cols=167 Identities=20% Similarity=0.368 Sum_probs=140.2
Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH-HHCCCCCEEEECCHHHH--HHHHHHHCCCCCCCC
Q ss_conf 8808998189989999999999987598621000013--566765-21066655750422332--343310000123422
Q gi|254780563|r 26 TKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSS--IQRPPI-TQGSPVDVIITKDETSL--ALNEDLLHKLPAHLI 100 (195)
Q Consensus 26 ~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~--~~~~~~-~~~~~~d~~~~~d~~~l--~~~~~~l~~~~~~~~ 100 (195)
++||+|||+++++.+++++++|||+|||+|+++.+++ .+++.. +.+.++|++++.+...+ ..+.+++.++.++..
T Consensus 1 a~ev~vY~~~~~~~~~~l~~~Fek~tGIkV~~~~~~~~~~~kl~~e~~~~~~Dvv~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (318)
T d1q35a_ 1 ANEVNVYSYRQPYLIEPMLKNFEKDTGIKVNIIFADKGLVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVL 80 (318)
T ss_dssp CCEEEEEESSCGGGTHHHHHHHHHHHCCEEEEEECC-CCHHHHHHHGGGCCCCEEEESCHHHHHHHHHTTCBCCCCCHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHH
T ss_conf 98599996988768999999998866978999979889999999647899998999788899999986375112574554
Q ss_pred -CCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCH-HHHHHHHHHHHCHHHHH
Q ss_conf -2347200012222234434505888733440134455788884086676859962898304-99999999960869999
Q gi|254780563|r 101 -KKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISF-HRLLNTMEQTPNKTVVQ 178 (195)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~-~~~~~a~~~~~G~~~~~ 178 (195)
..++..+++.+++|+++.....+++||+++++..+.|+||.||++|+|||+++++++..++ ..++..+....|++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~yN~~~~~~~~~p~s~~dl~~~~~kg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (318)
T d1q35a_ 81 EKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVRSGKNSYNVSLFAAMIEHYGIEKTK 160 (318)
T ss_dssp HHHSCGGGBCTTSSCEEEEEEEEEEEEETTTTCSCCTTCCGGGGGSGGGTTCEECSCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCHHHHHHCCCCCCCCCCEEEEEEECHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHH
T ss_conf 43131665421322100222037887325451356675114443212005737843872266789998776503753678
Q ss_pred HHHHHHHHCCCCCC
Q ss_conf 99999860887056
Q gi|254780563|r 179 DFIKNITANEILTK 192 (195)
Q Consensus 179 ~~l~~l~~N~~~~~ 192 (195)
++++++..|.....
T Consensus 161 ~~~~~~~~~~~~~~ 174 (318)
T d1q35a_ 161 AFLEGLKANLARKP 174 (318)
T ss_dssp HHHHHHHHTBSSCC
T ss_pred HHHHHHHHCCCEEC
T ss_conf 99887652043313
No 3
>d1nnfa_ c.94.1.1 (A:) Ferric-binding protein FbpA {Haemophilus influenzae [TaxId: 727]}
Probab=99.93 E-value=3.3e-25 Score=160.85 Aligned_cols=163 Identities=20% Similarity=0.355 Sum_probs=138.2
Q ss_pred CEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HH-HHCCCCCEEEECCHHHH--HHHHHHHCCCCCCCCC
Q ss_conf 089981899899999999999875986210000135667---65-21066655750422332--3433100001234222
Q gi|254780563|r 28 YLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRP---PI-TQGSPVDVIITKDETSL--ALNEDLLHKLPAHLIK 101 (195)
Q Consensus 28 ~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~---~~-~~~~~~d~~~~~d~~~l--~~~~~~l~~~~~~~~~ 101 (195)
||+|||+.+++.+++++++|||+|||||+++.+++.+.+ .. +.++++||+++.+...+ ..+.|++.++++....
T Consensus 1 ~~~vy~~~~~~~~~~l~~~Fek~tGIkV~~~~~~~~~~~~kl~ae~~~~~~DV~~~~~~~~~~~~~~~gll~~~~~~~~~ 80 (308)
T d1nnfa_ 1 DITVYNGQQKEAATAVAKAFEQETGIKVTLNSGKSEQLAGQLKEEGDKTPADVFYTEQTATFADLSEAGLLAPISEQTIQ 80 (308)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHSCCCEEEEECCHHHHHHHHHHHGGGCCCSEEEESCGGGHHHHHHTTCBCCCCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 97999388877999999999885598799997981999999997468999888997778999998630136777731110
Q ss_pred CCCCC--CCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHHHHHHHHHHHCHHHHHH
Q ss_conf 34720--0012222234434505888733440134455788884086676859962898304999999999608699999
Q gi|254780563|r 102 KNSFV--LKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHRLLNTMEQTPNKTVVQD 179 (195)
Q Consensus 102 ~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~~~~a~~~~~G~~~~~~ 179 (195)
..... ..+.+++|+++.....+++||++.++....|++|+||++++|++++.++++++.+..++.+.....|++.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~yn~~~~~~~~~p~t~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (308)
T d1nnfa_ 81 QTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYVSTSGAFLEQVVALSKMKGDKVALN 160 (308)
T ss_dssp TTCCTTCCCCTTSCCEEEEEEEEEEEEETTTCCGGGSCSSGGGGGSGGGTTTEEECTTSHHHHHHHHHHHHHHCHHHHHH
T ss_pred HCCHHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
T ss_conf 01212200134333345322320232015553344554546530382430232133346525766567887517477789
Q ss_pred HHHHHHHCCCC
Q ss_conf 99998608870
Q gi|254780563|r 180 FIKNITANEIL 190 (195)
Q Consensus 180 ~l~~l~~N~~~ 190 (195)
++++|+.|+.+
T Consensus 161 ~~~~l~~~~~~ 171 (308)
T d1nnfa_ 161 WLKGLKENGKL 171 (308)
T ss_dssp HHHHHHHHEEE
T ss_pred HHHHHHHHCCC
T ss_conf 99999871101
No 4
>d1y4ta_ c.94.1.1 (A:) Ferric-binding protein FbpA {Campylobacter jejuni [TaxId: 197]}
Probab=99.91 E-value=1e-23 Score=152.43 Aligned_cols=165 Identities=21% Similarity=0.310 Sum_probs=133.6
Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHHHCCCCCEEEECCHHHHH--HHHHHHCCCCCCCC
Q ss_conf 8089981899899999999999875986210000135667----65210666557504223323--43310000123422
Q gi|254780563|r 27 KYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRP----PITQGSPVDVIITKDETSLA--LNEDLLHKLPAHLI 100 (195)
Q Consensus 27 ~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~----~~~~~~~~d~~~~~d~~~l~--~~~~~l~~~~~~~~ 100 (195)
.||+|||+++++..++++++|||+|||+|+++..++.+.+ .++.+.++|++++.+...+. ...+.+.+++....
T Consensus 1 ~ev~iy~~~~~~~~~~i~~~Fek~tGIkV~~~~~~~~~~~~kl~ae~~~~~~Dv~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (317)
T d1y4ta_ 1 SELNIYSARHYNADFEIIKKFEEKTGIKVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYL 80 (317)
T ss_dssp CCEEEEECCCCTHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHGGGCCCCEEEESSHHHHHHHHHTTCEECCCCHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCH
T ss_conf 93899848984507999999999869889999798299999999748999970999687899999876310354332102
Q ss_pred CC-CCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCC-HHHHHHHHHHHHCHHHHH
Q ss_conf 23-4720001222223443450588873344013445578888408667685996289830-499999999960869999
Q gi|254780563|r 101 KK-NSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNIS-FHRLLNTMEQTPNKTVVQ 178 (195)
Q Consensus 101 ~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s-~~~~~~a~~~~~G~~~~~ 178 (195)
.. .+...++..++++++.....+++||++..+..++|+||+||++|+++|++.+.+.+++ +..++.++....|++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~yn~~~~~~~~~p~tw~dL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 160 (317)
T d1y4ta_ 81 EEFIPAHLRDKDKEWFAITKRARIIAYNKNTNIDISKMKNYEDLAKAEFKGEIVMRSATAPYSKTLLASIIANDGNKEAK 160 (317)
T ss_dssp HHHSCGGGBCTTSSCEEEEEEEEEEEEETTSCCCCTTCCSGGGGGCGGGTTCEECCCTTSHHHHHHHHHHHHHHCHHHHH
T ss_pred HHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHH
T ss_conf 32031665411235555432344432333321246688887885030004724430244026778888888602872068
Q ss_pred HHHHHHHHCCCCC
Q ss_conf 9999986088705
Q gi|254780563|r 179 DFIKNITANEILT 191 (195)
Q Consensus 179 ~~l~~l~~N~~~~ 191 (195)
++.+.+..|....
T Consensus 161 ~~~~~~~~~~~~~ 173 (317)
T d1y4ta_ 161 AWAKGVLENLATN 173 (317)
T ss_dssp HHHHHHHHHBSSS
T ss_pred HHHHHHHHHCCCC
T ss_conf 9999887530335
No 5
>d1y9ua_ c.94.1.1 (A:) Ferric-binding protein FbpA {Bordetella pertussis [TaxId: 520]}
Probab=99.84 E-value=1.5e-20 Score=134.28 Aligned_cols=158 Identities=19% Similarity=0.386 Sum_probs=112.1
Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH-HHCCCCCEEEECCHHHHH--HHHHHHCCCCCCCCC
Q ss_conf 808998189989999999999987598621000013--566765-210666557504223323--433100001234222
Q gi|254780563|r 27 KYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSS--IQRPPI-TQGSPVDVIITKDETSLA--LNEDLLHKLPAHLIK 101 (195)
Q Consensus 27 ~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~--~~~~~~-~~~~~~d~~~~~d~~~l~--~~~~~l~~~~~~~~~ 101 (195)
+||+|||+++++.+++++++||++|||+|+++.+++ .+++.. ..+.++||+++.+...+. ...+++.++.....+
T Consensus 1 ~el~vYs~~~e~~~~~li~~Fek~tGIkV~~~~~~~~~~~kl~ae~~~~~~DVv~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (318)
T d1y9ua_ 1 DEVSLYTTREPKLIQPLLDAFAKDSGIKVNTVFVKDGLLERVRAEGDKSPADVLMTVDIGNLIDLVNGGVTQKIQSQTLD 80 (318)
T ss_dssp CEEEEEESSCGGGTHHHHHHHHHHHCCEEEEEECSSCHHHHHHHHGGGCCCCEEEEESHHHHHHHHHTTCEECCCCHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 93899969887789999999988669889999798899999996578999888996878999988752021100112422
Q ss_pred CC-CCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHH-HHHHHHHHHCHHHHHH
Q ss_conf 34-720001222223443450588873344013445578888408667685996289830499-9999999608699999
Q gi|254780563|r 102 KN-SFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHR-LLNTMEQTPNKTVVQD 179 (195)
Q Consensus 102 ~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~-~~~a~~~~~G~~~~~~ 179 (195)
.. +...++..+++.++.....++.||++.. ..|++|.||++|+|||++.++.+..+... +....+...+......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~yn~~~~---~~p~~~~~l~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (318)
T d1y9ua_ 81 SVVPANLRGAEGSWYALSLRDRVLYVEKDLK---LDSFRYGDLADPKWKGKVCIRSGQHPYNTALVAAMIAHDGAEATEK 157 (318)
T ss_dssp HHSCGGGBCGGGSCEEEEEEEEEEEEETTCC---CCCCBGGGGGCGGGTTCEECCCTTSHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEECCCCC---CCCCCHHHCCCHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHH
T ss_conf 1111012355432354310012332033456---8975243203813236401047754227999999987505541555
Q ss_pred HHHHHHHC
Q ss_conf 99998608
Q gi|254780563|r 180 FIKNITAN 187 (195)
Q Consensus 180 ~l~~l~~N 187 (195)
+......+
T Consensus 158 ~~~~~~~~ 165 (318)
T d1y9ua_ 158 WLRGVKAN 165 (318)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 66667654
No 6
>d1pota_ c.94.1.1 (A:) Spermidine/putrescine-binding protein PotD {Escherichia coli [TaxId: 562]}
Probab=99.69 E-value=1.2e-17 Score=117.80 Aligned_cols=160 Identities=13% Similarity=0.158 Sum_probs=103.8
Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH----HHHHHCCCCCEEEECCH-HHHHHHHHHHCCCCCCC-
Q ss_conf 8808998189989999999999987598621000013566----76521066655750422-33234331000012342-
Q gi|254780563|r 26 TKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQR----PPITQGSPVDVIITKDE-TSLALNEDLLHKLPAHL- 99 (195)
Q Consensus 26 ~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~----~~~~~~~~~d~~~~~d~-~~l~~~~~~l~~~~~~~- 99 (195)
.++|+|||+..+ ..+.++++||++|||+|+++..++.+. +..+++.+.|+++.... ..-....|++++++...
T Consensus 1 ~~~l~~~~w~~~-~~~~ii~~Fe~~tgI~V~~~~~~~~~~~~~~l~a~~~~~~Dvv~~~~~~~~~~~~~g~~~~ld~~~~ 79 (322)
T d1pota_ 1 NNTLYFYNWTEY-VPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKL 79 (322)
T ss_dssp CEEEEEEEESSS-SCTTHHHHHHHHHCEEEEEEEESCHHHHHHHHTTCSSSCSSBBCCBGGGHHHHHHHTCBCCCCTTSC
T ss_pred CCEEEEEECCCC-CCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCHHHC
T ss_conf 997999957763-6989999999996987999957999999999980699998099968079999876785233662220
Q ss_pred --CCCCCCCCCC-----CCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHHHH-HHHHHH
Q ss_conf --2234720001-----22222344345058887334401344557888840866768599628983049999-999996
Q gi|254780563|r 100 --IKKNSFVLKN-----ENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHRLL-NTMEQT 171 (195)
Q Consensus 100 --~~~~~~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~~~-~a~~~~ 171 (195)
...+.+.+.+ .+.+..|+.....+++||++.++.. .|++|.||++|+|+|++++.++..+..... ..+...
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~l~Yn~~~~~~~-~p~sw~dl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 158 (322)
T d1pota_ 80 TNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPK-SVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYS 158 (322)
T ss_dssp TTGGGBCGGGSCCTTSTTCSSCEEEEEEEEEEEEETTTSCTT-TCCSSGGGGSGGGTTCEEECSCHHHHHHHHHHHTTCC
T ss_pred CHHHCCCHHHHCCCCCCCCCEEEEEEEEEEEEEEHHHHCCCC-CCCCHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 002104866521445899836844664233467425440841-1374999848676204555685144568999984357
Q ss_pred ---HCH---HHHHHHHHHHHHC
Q ss_conf ---086---9999999998608
Q gi|254780563|r 172 ---PNK---TVVQDFIKNITAN 187 (195)
Q Consensus 172 ---~G~---~~~~~~l~~l~~N 187 (195)
.+. ...+++++++..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~ 180 (322)
T d1pota_ 159 GNTTDPKEIEAAYNELKKLMPN 180 (322)
T ss_dssp TTCCCHHHHHHHHHHHHHTGGG
T ss_pred CCCCCHHHHHHHHHHHHHHCCC
T ss_conf 4335436677899998875011
No 7
>d1sbpa_ c.94.1.1 (A:) Sulphate-binding protein {Salmonella typhimurium [TaxId: 90371]}
Probab=99.43 E-value=7.2e-13 Score=90.53 Aligned_cols=149 Identities=11% Similarity=-0.002 Sum_probs=92.9
Q ss_pred CEEEECC-CCHHHHHHHHHHH----HHHCCCCCCCC--CHHHHHHHH-HHHCCCCCEEEECCHHHH--HHHHHHHCCCCC
Q ss_conf 0899818-9989999999999----98759862100--001356676-521066655750422332--343310000123
Q gi|254780563|r 28 YLTLYTD-QNQSVMLPIIHSF----EERTGVKISPI--YTSSIQRPP-ITQGSPVDVIITKDETSL--ALNEDLLHKLPA 97 (195)
Q Consensus 28 ~lvVYs~-~~~~~~~~~~~~F----ek~tgIkV~~~--~~~~~~~~~-~~~~~~~d~~~~~d~~~l--~~~~~~l~~~~~ 97 (195)
+|+--|+ ..+++.+++.++| +++|||+|++. .+++.++.. ..++.++|++++.+...+ ..+.|++.+.
T Consensus 4 ~~~~~~y~~~~e~~~ei~~af~~~~~~~tG~~V~v~~~~~gsg~~~~~i~~g~~aDV~~~a~~~~~~~l~~~gll~~~-- 81 (309)
T d1sbpa_ 4 QLLNVSYDPTRELYEQYNKAFSAHWKQETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERGRIDKN-- 81 (309)
T ss_dssp EEEEEECSTTHHHHHHHHHHHHHHHHHHHSCEEEEEEEESCHHHHHHHHHTTCCCSEEEESSHHHHHHHHHTTSSCTT--
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCC--
T ss_conf 799986124299999999999999877019977999647865999999975999889996778889999977985531--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHHHH----HHHHHHH-
Q ss_conf 42223472000122222344345058887334401344557888840866768599628983049999----9999960-
Q gi|254780563|r 98 HLIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHRLL----NTMEQTP- 172 (195)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~~~----~a~~~~~- 172 (195)
.+....++..+.....++++|++.. ..|++|.||++|.+|+.+..|.+++++.... .......
T Consensus 82 ---------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~w~dL~~~~~k~~~~~p~~~~~g~~~~~~~~~~~~~~~~ 149 (309)
T d1sbpa_ 82 ---------WIKRLPDDSAPYTSTIVFLVRKGNP---KQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNN 149 (309)
T ss_dssp ---------GGGGSHHHHCSEEBCEEEEEETTCT---TCCCSGGGGGSTTCCEECCCTTTCHHHHHHHHHHHHHHHHHTT
T ss_pred ---------CHHCCCCCCEEEEEEEEEEECCCCC---CCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf ---------0000355630342005899727886---5654023320012210123344662038999999864430254
Q ss_pred -CHHHHHHHHHHHHHCCCC
Q ss_conf -869999999998608870
Q gi|254780563|r 173 -NKTVVQDFIKNITANEIL 190 (195)
Q Consensus 173 -G~~~~~~~l~~l~~N~~~ 190 (195)
.++.+++|+++|..|+..
T Consensus 150 ~~~~~~~~~~~~l~~~~~~ 168 (309)
T d1sbpa_ 150 NDQAKAEDFVKALFKNVEV 168 (309)
T ss_dssp TCHHHHHHHHHHHHHTEEE
T ss_pred CHHHHHHHHHHHHHCCCCE
T ss_conf 1678999999987514744
No 8
>d1amfa_ c.94.1.1 (A:) Molybdate-binding protein, ModA {Escherichia coli [TaxId: 562]}
Probab=99.25 E-value=1e-11 Score=83.89 Aligned_cols=130 Identities=14% Similarity=0.150 Sum_probs=75.8
Q ss_pred CCEEEECCCC-HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-CCCCCEEEECCHHHHHHH--HHHHCCCCCCCCCC
Q ss_conf 8089981899-8999999999998759862100001356676521-066655750422332343--31000012342223
Q gi|254780563|r 27 KYLTLYTDQN-QSVMLPIIHSFEERTGVKISPIYTSSIQRPPITQ-GSPVDVIITKDETSLALN--EDLLHKLPAHLIKK 102 (195)
Q Consensus 27 ~~lvVYs~~~-~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~~-~~~~d~~~~~d~~~l~~~--~~~l~~~~~~~~~~ 102 (195)
+||+||++.+ ...+++++++|||+|||+|+++.+++.+.+.+.+ +..+|+++..+....... .+...
T Consensus 1 Gel~vy~a~s~~~~~~~l~~~Fek~~gi~V~~~~~~sg~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 71 (231)
T d1amfa_ 1 GKITVFAAASLTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAID--------- 71 (231)
T ss_dssp CEEEEEEEGGGHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHTCCCSEEECSSHHHHHHHHHTTCBC---------
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCC---------
T ss_conf 98999997471999999999998821987999978829999999838986699966334568988605667---------
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCC---CCCHHHHCCHHHCCEEEECCCCCCHH-HHHHHHHHHHCHHH
Q ss_conf 4720001222223443450588873344013445---57888840866768599628983049-99999999608699
Q gi|254780563|r 103 NSFVLKNENKKLMRISFDTQVLAYSTKRIKIADL---PKSVFDLTNAQWKKRLSIAPNNISFH-RLLNTMEQTPNKTV 176 (195)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~---P~sw~DL~~p~~kG~i~~~~~~~s~~-~~~~a~~~~~G~~~ 176 (195)
.. .+.........+.++......... |++|.|| .++|++++.++..+.. ..........|+..
T Consensus 72 -------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (231)
T d1amfa_ 72 -------TA-TRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSL---LNGGRLAVGDPEHVPAGIYAKEALQKLGAWD 138 (231)
T ss_dssp -------GG-GCEEEEEECEEEEEETTCCCCCCCCSTTCCHHHH---HTTCCEEEECTTTCHHHHHHHHHHHHTTCHH
T ss_pred -------CC-CCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHH---CCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
T ss_conf -------66-5123204541122101222342323357789861---0799689988987338999999888717730
No 9
>d1a99a_ c.94.1.1 (A:) Putrescine receptor (PotF) {Escherichia coli [TaxId: 562]}
Probab=99.20 E-value=7.1e-12 Score=84.83 Aligned_cols=162 Identities=15% Similarity=0.158 Sum_probs=100.5
Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH---HHHHHHCCCCCEEEECCH-HHHHHHHHHHCCCCCCCCC
Q ss_conf 880899818998999999999998759862100001356---676521066655750422-3323433100001234222
Q gi|254780563|r 26 TKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQ---RPPITQGSPVDVIITKDE-TSLALNEDLLHKLPAHLIK 101 (195)
Q Consensus 26 ~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~---~~~~~~~~~~d~~~~~d~-~~l~~~~~~l~~~~~~~~~ 101 (195)
+++|+||++.++ ..+.++++||++|||+|+++..+..+ .++...++..|+++.... .....+.|+++++......
T Consensus 1 ~ktL~v~~W~~y-~~~~li~~Fek~tgI~V~~~~~~~~~~~~~~l~ag~~~~Dv~~~~~~~~~~~~~~g~l~~l~~~~~~ 79 (341)
T d1a99a_ 1 QKTLHIYNWSDY-IAPDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLP 79 (341)
T ss_dssp CCEEEEEEETTC-SCTTHHHHHHHHHCCEEEEEEESCHHHHHHHHHHCCCCCSEECCBHHHHHHHHHTTCBCCCCGGGCG
T ss_pred CCEEEEEECCCC-CCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCCHHCCC
T ss_conf 978999956875-7989999999985997999958999999999982899995999887999999976983312300032
Q ss_pred CC---CCCC-------CCCCCCCCCCCCCEEEEEEEHHHHCCC----CCCCCHHHHCCHHHCCEEEECCC--CCCHHHHH
Q ss_conf 34---7200-------012222234434505888733440134----45578888408667685996289--83049999
Q gi|254780563|r 102 KN---SFVL-------KNENKKLMRISFDTQVLAYSTKRIKIA----DLPKSVFDLTNAQWKKRLSIAPN--NISFHRLL 165 (195)
Q Consensus 102 ~~---~~~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~----~~P~sw~DL~~p~~kG~i~~~~~--~~s~~~~~ 165 (195)
.. .+.+ .+...+..++.....++.||++.++.. .+|++|.||++++++++...... ......++
T Consensus 80 ~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~yn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
T d1a99a_ 80 EWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVF 159 (341)
T ss_dssp GGGGBCHHHHHHHHTTSGGGCSEEEEEEEEEEEEEEHHHHHHHHCTTCCTTSTHHHHSHHHHHHHGGGCEEECSCHHHHH
T ss_pred CCHHCCHHHHHCCCCCCCCCEEEEEEECCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 30004766640110012697257543214300100155540156886410126899877664103567743221289999
Q ss_pred HHHHHHHCHH-----------HHHHHHHHHHHCC
Q ss_conf 9999960869-----------9999999986088
Q gi|254780563|r 166 NTMEQTPNKT-----------VVQDFIKNITANE 188 (195)
Q Consensus 166 ~a~~~~~G~~-----------~~~~~l~~l~~N~ 188 (195)
.......|.+ .+.+.+..++.|.
T Consensus 160 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (341)
T d1a99a_ 160 ATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNI 193 (341)
T ss_dssp HHHHHHTTSCTTCCCHHHHHTHHHHHHHHHGGGC
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 9999975988655440467788999887535562
No 10
>d1atga_ c.94.1.1 (A:) Molybdate-binding protein, ModA {Azotobacter vinelandii [TaxId: 354]}
Probab=99.00 E-value=1.2e-09 Score=72.04 Aligned_cols=124 Identities=16% Similarity=0.116 Sum_probs=73.5
Q ss_pred CEEEECCCC-HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-HCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 089981899-899999999999875986210000135667652-106665575042233234331000012342223472
Q gi|254780563|r 28 YLTLYTDQN-QSVMLPIIHSFEERTGVKISPIYTSSIQRPPIT-QGSPVDVIITKDETSLALNEDLLHKLPAHLIKKNSF 105 (195)
Q Consensus 28 ~lvVYs~~~-~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~-~~~~~d~~~~~d~~~l~~~~~~l~~~~~~~~~~~~~ 105 (195)
||+|+++.+ ...++++.++||++|||+|+++.+++.+.+.+. ++.++|+++..+............
T Consensus 1 el~v~~~~~~~~~~~~l~~~Fe~~tGi~V~~~~g~s~~l~~~i~~g~~~dv~~~~~~~~~~~~~~~~~------------ 68 (231)
T d1atga_ 1 ELKVVTATNFLGTLEQLAGQFAKQTGHAVVISSGSSGPVYAQIVNGAPYNVFFSADEKSPEKLDNQGF------------ 68 (231)
T ss_dssp CEEEEEEGGGHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHTTCCCSEEECSSSHHHHHHHHTTC------------
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCC------------
T ss_conf 97999950469999999999999649789999777699999998289886687510466666564013------------
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCC--CHHHHHHHHHHH
Q ss_conf 000122222344345058887334401344557888840866768599628983--049999999996
Q gi|254780563|r 106 VLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNI--SFHRLLNTMEQT 171 (195)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~--s~~~~~~a~~~~ 171 (195)
.....+..... ..+++... .....|++|+||++|+|++ +++++++. ++......+...
T Consensus 69 ---~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~l~~~~~~~-i~~~~p~~~~~g~~~~~~~~~~ 128 (231)
T d1atga_ 69 ---ALPGSRFTYAI--GKLVLWSA--KPGLVDNQGKVLAGNGWRH-IAISNPQIAPYGLAGTQVLTHL 128 (231)
T ss_dssp ---BCTTCCEEEEE--CCEEEEES--STTTSCTTSGGGGSSSCSC-EEEECTTTCHHHHHHHHHHHHT
T ss_pred ---CCCCCCCEECC--CCEEEECC--CCCCCCCCHHHHCCCCCCE-EEEECCCCCHHHHHHHHHHHHH
T ss_conf ---22231000014--52000003--5777897688835743577-9995676561468998765400
No 11
>d1laxa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]}
Probab=98.87 E-value=1.2e-08 Score=66.38 Aligned_cols=167 Identities=14% Similarity=0.143 Sum_probs=97.8
Q ss_pred CCCCCEEEECCC--CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---HHHCCCCCEEEECC-HHHHHHHHHHHCCCCC
Q ss_conf 458808998189--98999999999998759862100001356676---52106665575042-2332343310000123
Q gi|254780563|r 24 NTTKYLTLYTDQ--NQSVMLPIIHSFEERTGVKISPIYTSSIQRPP---ITQGSPVDVIITKD-ETSLALNEDLLHKLPA 97 (195)
Q Consensus 24 ~~~~~lvVYs~~--~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~---~~~~~~~d~~~~~d-~~~l~~~~~~l~~~~~ 97 (195)
.++.+|+|+++. ..+.+.+++++||+++||+|++...+.....+ ...++..|+++... ........|++.++..
T Consensus 2 ~~eg~ltvW~~~~~~~~~~~~~~~~fe~~~gv~V~v~~~~~~~~kl~~~~~~g~~pDv~~~~~~~~~~~~~~g~l~~L~~ 81 (369)
T d1laxa_ 2 IEEGKLVIWINGDKGYNGLAEVGKKFEKDTDPKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITP 81 (369)
T ss_dssp CCTTSEEEECCTTSCHHHHHHHHHHHHHHHCCCEEEECCTTHHHHHHHHHTTTCSCSEEEEEGGGHHHHHHTTCBCCCCC
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCH
T ss_conf 86308999967983169999999998652198799996887999999998669998699989088999998799675884
Q ss_pred CCC--CCCCCCCCC---CCCCC--CCCCCCEEEEEEEHHHHCCCCCCCCHHHHCC----HHHCCEEEECCC--C-CCHHH
Q ss_conf 422--234720001---22222--3443450588873344013445578888408----667685996289--8-30499
Q gi|254780563|r 98 HLI--KKNSFVLKN---ENKKL--MRISFDTQVLAYSTKRIKIADLPKSVFDLTN----AQWKKRLSIAPN--N-ISFHR 163 (195)
Q Consensus 98 ~~~--~~~~~~~~~---~~~~~--~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~----p~~kG~i~~~~~--~-~s~~~ 163 (195)
... ....+...+ .+|.. +|+.....++.||++.+. ++|++|+++.+ .+-+|+..+.-+ . ..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~dG~~ygiP~~~~~~~~~ynkd~~~--~~p~Tw~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (369)
T d1laxa_ 82 DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLP--NPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWP 159 (369)
T ss_dssp CHHHHTTBCHHHHHHTEETTEECSEEEEEECCEEEEETTTCS--SCCSBGGGHHHHHHHHHTTTCEEECCCCSSGGGTHH
T ss_pred HHHHHHHHHHHHHHHCEECCEEEEEEEECCCEEEEEECCCCC--CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
T ss_conf 453345546889865348999989751022013577500011--211005789987644203787563257776400489
Q ss_pred HHHHHHH------------------HHCHHHHHHHHHHHHHCCCCCC
Q ss_conf 9999999------------------6086999999999860887056
Q gi|254780563|r 164 LLNTMEQ------------------TPNKTVVQDFIKNITANEILTK 192 (195)
Q Consensus 164 ~~~a~~~------------------~~G~~~~~~~l~~l~~N~~~~~ 192 (195)
++.+.-. ..+...++++++.|..++...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~ 206 (369)
T d1laxa_ 160 LIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA 206 (369)
T ss_dssp HHHHTTCEEEEECSSCEEEEEEESSSHHHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99871772000235554445445577899999999999875276444
No 12
>d1elja_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.65 E-value=3.7e-08 Score=63.66 Aligned_cols=121 Identities=12% Similarity=0.161 Sum_probs=75.9
Q ss_pred CCCCCCEEEECCCCH---HHHHHHHHHHHHHC-CCCCCCCCHHHHHHHH---HHHCCCCCEEEECC-HHHHHHHHHHHCC
Q ss_conf 445880899818998---99999999999875-9862100001356676---52106665575042-2332343310000
Q gi|254780563|r 23 ENTTKYLTLYTDQNQ---SVMLPIIHSFEERT-GVKISPIYTSSIQRPP---ITQGSPVDVIITKD-ETSLALNEDLLHK 94 (195)
Q Consensus 23 ~~~~~~lvVYs~~~~---~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~---~~~~~~~d~~~~~d-~~~l~~~~~~l~~ 94 (195)
+.++++|||+.+.+. +..++++++|++++ ||+|+++..+.....+ ...++..|++.... ........|++.+
T Consensus 2 k~~eg~i~~W~~~~~~~~~~~~~~~~~F~~~~p~I~v~~~~~~~~~~~l~~~~~~g~~pDi~~~~~~~~~~~~~~g~l~~ 81 (380)
T d1elja_ 2 KIEEGKVVIWHAMQPNELEVFQSLAEEYMALCPEVEIVFEQKPNLEDALKAAIPTGQGPDLFIWAHDWIGKFAEAGLLEP 81 (380)
T ss_dssp CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCTTEEEEEEECTTHHHHHHHHTTTTCSCSEEEEEGGGHHHHHHTTCBCC
T ss_pred CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCC
T ss_conf 87663899995898038999999999999878397999986899999999999769998199999377999998799630
Q ss_pred CCCC----CCCCCCCCCCC---CCCCC--CCCCCCEEEEEEEHHHHCCCCCCCCHHHHCC
Q ss_conf 1234----22234720001---22222--3443450588873344013445578888408
Q gi|254780563|r 95 LPAH----LIKKNSFVLKN---ENKKL--MRISFDTQVLAYSTKRIKIADLPKSVFDLTN 145 (195)
Q Consensus 95 ~~~~----~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~ 145 (195)
+..- ..+...+...+ .+|.. +|......++.||++.+.. +|+||+||.+
T Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~dG~~y~~P~~~~~~~l~ynkd~~~~--~P~T~~e~~~ 139 (380)
T d1elja_ 82 IDEYVTEDLLNEFAPMAQDAMQYKGHYYALPFAAETVAIIYNKEMVSE--PPKTFDEMKA 139 (380)
T ss_dssp CTTTCCHHHHTTBCHHHHHHTEETTEECEEEEEEEECEEEEETTTCSS--CCSSHHHHHH
T ss_pred CCHHHHHCCCCCCCHHHHHHEEECCEECCCCCCCCCHHHHHHHHHHHH--CCCCHHHHHH
T ss_conf 866540022111216666410345430112222210356666667642--1332899999
No 13
>d1ursa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Alicyclobacillus acidocaldarius [TaxId: 405212]}
Probab=98.64 E-value=2.1e-07 Score=59.39 Aligned_cols=162 Identities=12% Similarity=0.181 Sum_probs=90.8
Q ss_pred CCEEEECCCCHH---HHHHHHHHHHHHCCCCC-CCCCHH--H-HHHHH--HHHCCCCCEEEECC--HHHHHHHHHHHCCC
Q ss_conf 808998189989---99999999998759862-100001--3-56676--52106665575042--23323433100001
Q gi|254780563|r 27 KYLTLYTDQNQS---VMLPIIHSFEERTGVKI-SPIYTS--S-IQRPP--ITQGSPVDVIITKD--ETSLALNEDLLHKL 95 (195)
Q Consensus 27 ~~lvVYs~~~~~---~~~~~~~~Fek~tgIkV-~~~~~~--~-~~~~~--~~~~~~~d~~~~~d--~~~l~~~~~~l~~~ 95 (195)
++|+|+++.... ..+.++++|+++||+.+ ++.... . .+++. ...++..|++...+ ........|++.++
T Consensus 1 qTIt~w~~~~~~~~~~~~~~~~~F~~~~p~~~v~~~~~~~~~~~~~l~~~~~ag~~pDi~~~~~~~~~~~~~~~g~l~~L 80 (367)
T d1ursa_ 1 QTITVWSWQTGPELQDVKQIAAQWAKAHGDKVIVVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPV 80 (367)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHHHHHHHCCEEEEEECTTCTTCTTHHHHHHHTTCCCSEEEEEEGGGHHHHHHTTCBCCC
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCC
T ss_conf 97999827884579999999999999879989999848828999999999966999839998582789999987995400
Q ss_pred CCCCCC--CCCCCCCC---CCCCC--CCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHH-HHHHH
Q ss_conf 234222--34720001---22222--344345058887334401344557888840866768599628983049-99999
Q gi|254780563|r 96 PAHLIK--KNSFVLKN---ENKKL--MRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFH-RLLNT 167 (195)
Q Consensus 96 ~~~~~~--~~~~~~~~---~~~~~--~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~-~~~~a 167 (195)
...... ...+...+ .+|.. +|+.....++.||++.++ ++|+||+||.+..-+..+.....+..+. .++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~l~yNk~~~~--~~p~T~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (367)
T d1ursa_ 81 PSGVLNTGLYAPNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVP--QPPQTWAEFVKDANAHGFMYDQANLYFDYAIIGG 158 (367)
T ss_dssp CTTSCCGGGSCHHHHHTTEETTEECSEEEEEEECEEEEETTTCS--SCCCSHHHHHHHHHHHCEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHCEECCEEEEEECCCCCEEEEEECCCCC--CCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
T ss_conf 24554411479778854638877876420354158887401023--4310089999998663036677775210688875
Q ss_pred HHH----H-----------H---CHHHHHHHHHHHHHCCCC
Q ss_conf 999----6-----------0---869999999998608870
Q gi|254780563|r 168 MEQ----T-----------P---NKTVVQDFIKNITANEIL 190 (195)
Q Consensus 168 ~~~----~-----------~---G~~~~~~~l~~l~~N~~~ 190 (195)
... . . +..+++++++.|..++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~ 199 (367)
T d1ursa_ 159 YGGYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHW 199 (367)
T ss_dssp TTCEEEEEETTEEEEEEEESSSHHHHHHHHHHHHHHHTSCS
T ss_pred HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 41022115886445431355888899999999999861365
No 14
>d1eu8a_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=98.23 E-value=4.5e-06 Score=51.74 Aligned_cols=120 Identities=13% Similarity=0.123 Sum_probs=69.8
Q ss_pred CCCEEEECCCCH---HHHHHHHHHHHHHC-CCCCCCCCHH--HHH----HH--HHHHCCCCCEEEECC-HHHHHHHHHHH
Q ss_conf 880899818998---99999999999875-9862100001--356----67--652106665575042-23323433100
Q gi|254780563|r 26 TKYLTLYTDQNQ---SVMLPIIHSFEERT-GVKISPIYTS--SIQ----RP--PITQGSPVDVIITKD-ETSLALNEDLL 92 (195)
Q Consensus 26 ~~~lvVYs~~~~---~~~~~~~~~Fek~t-gIkV~~~~~~--~~~----~~--~~~~~~~~d~~~~~d-~~~l~~~~~~l 92 (195)
++++|+-.+... +..+.++++|++++ ||+|+++... ..+ .+ +...+...|+++... ........|++
T Consensus 3 ~g~i~~~~~g~p~~~~~~~~~i~~F~~~~p~i~V~~~~~~~~~~~~~~~~~~~~~a~g~~PDi~~~~~~~~~~~~~~g~l 82 (407)
T d1eu8a_ 3 EGKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASGWL 82 (407)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHHHHHHSTTCEEEEEECCSSHHHHHHHHHHHHTTTCSSEEEEEEETTTHHHHHHHTCB
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCC
T ss_conf 42699997897669999999999999888691899997368459999999999982899987999894889999987993
Q ss_pred CCCCCCC------CC-CCCC---CCCCCCC--CCCCCCCCEEEEEEEHHHHCCC---CCCCCHHHHCC
Q ss_conf 0012342------22-3472---0001222--2234434505888733440134---45578888408
Q gi|254780563|r 93 HKLPAHL------IK-KNSF---VLKNENK--KLMRISFDTQVLAYSTKRIKIA---DLPKSVFDLTN 145 (195)
Q Consensus 93 ~~~~~~~------~~-~~~~---~~~~~~~--~~~~~~~~~~~~~~n~~~~~~~---~~P~sw~DL~~ 145 (195)
.++..-. .. ..+. .....+| +.+|......++.||++.++.. .+|++|+||.+
T Consensus 83 ~dL~~~~~~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~~~yNkdl~~~~G~~~p~~T~de~~~ 150 (407)
T d1eu8a_ 83 EPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVE 150 (407)
T ss_dssp CCSHHHHHHHTCCGGGBCHHHHHHHTEETTEECCEEEEEEECEEEEEHHHHHHTTCCSCCSBHHHHHH
T ss_pred CCCCHHHHHCCHHHHHHCHHHHHHHHCCCCEEECCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHH
T ss_conf 33857655311325540488998751345423027630123455416125554215798889999999
No 15
>d3thia_ c.94.1.1 (A:) Thiaminase I {Paenibacillus thiaminolyticus [TaxId: 49283]}
Probab=97.91 E-value=5.8e-06 Score=51.12 Aligned_cols=114 Identities=14% Similarity=0.169 Sum_probs=68.4
Q ss_pred EEEECCC--CHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCEEEECC-HHHHHHHHHHHCCCCCCCCCCC-
Q ss_conf 8998189--9899999999999875-986210000135667652106665575042-2332343310000123422234-
Q gi|254780563|r 29 LTLYTDQ--NQSVMLPIIHSFEERT-GVKISPIYTSSIQRPPITQGSPVDVIITKD-ETSLALNEDLLHKLPAHLIKKN- 103 (195)
Q Consensus 29 lvVYs~~--~~~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~~~~~~~~d~~~~~d-~~~l~~~~~~l~~~~~~~~~~~- 103 (195)
+.+|++. .....++++++|+|++ ||+|+++..+.... ..+...|++.... ........|.++++........
T Consensus 5 ~~~~~~~p~~~~~~~~~~~~F~~~~P~V~v~~~~~~~~~~---~~~~~pDv~~~~~~~~~~~~~~g~l~~L~~~~~~~~~ 81 (362)
T d3thia_ 5 VAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSA---DPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDIDQAE 81 (362)
T ss_dssp EECCSCSSCHHHHHHHHHHHHHHHCTTSEEEECCCCTTTC---CCCTTCCEEEEEGGGHHHHHHTTCEECBCGGGCTTGG
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHH---CCCCCCEEEEECHHHHHHHHHCCCCCCCCHHHHHCCC
T ss_conf 9966788867999999999999988193899996652544---4899896999890889999988982338710111100
Q ss_pred --CCCCC---CCCCCC--CCCCCCEEEEEEEHHHHCCCC---CCCCHHHHCC
Q ss_conf --72000---122222--344345058887334401344---5578888408
Q gi|254780563|r 104 --SFVLK---NENKKL--MRISFDTQVLAYSTKRIKIAD---LPKSVFDLTN 145 (195)
Q Consensus 104 --~~~~~---~~~~~~--~~~~~~~~~~~~n~~~~~~~~---~P~sw~DL~~ 145 (195)
.+... ..+|.. +|+.....++.||++.++... +|++|+++..
T Consensus 82 ~~~~~~~~~~~~dG~~y~vP~~~~~~~~~ynkd~~~~aG~~~p~~~~~~~~~ 133 (362)
T d3thia_ 82 DVLPFALQGAKRNGEVYGLPQILCTNLLFYRKGDLKIGQVDNIYELYKKIGT 133 (362)
T ss_dssp GBCHHHHHHTEETTEECCEEEEEECEEEEEETTCHHHHTCCBHHHHHHHHCC
T ss_pred HHHHHHHHCEEECCEEEEEEEECCCEEEEECHHHHHHCCCCCCCCCHHHHHH
T ss_conf 1113344311569979997651210799961468997389999973789999
No 16
>d2onsa1 c.94.1.1 (A:32-342) Molybdate-binding protein, ModA {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.56 E-value=6.3e-05 Score=45.19 Aligned_cols=71 Identities=20% Similarity=0.201 Sum_probs=48.3
Q ss_pred CEEEECCC-CHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHH--HHHHCCCCCEEEECCHHHH--HHHHHHHCCCCCC
Q ss_conf 08998189-9899999999999875-986210000135667--6521066655750422332--3433100001234
Q gi|254780563|r 28 YLTLYTDQ-NQSVMLPIIHSFEERT-GVKISPIYTSSIQRP--PITQGSPVDVIITKDETSL--ALNEDLLHKLPAH 98 (195)
Q Consensus 28 ~lvVYs~~-~~~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~--~~~~~~~~d~~~~~d~~~l--~~~~~~l~~~~~~ 98 (195)
+|+||.+. ..+..++++++||+++ ||+|++...+..+.+ +...+++.|+++..+...+ ..+.+.+.++...
T Consensus 3 ~L~v~~ags~~~~~~~~~~~Fe~~~P~I~V~~~~~~~~~~~~~~~a~g~~pDv~~~~~~~~~~~~~~~~~~~~~~~~ 79 (311)
T d2onsa1 3 KLKVFHAGSLTEPMKAFKRAFEEKHPNVEVQTEAAGSAATIRKVTELGRKADVIATADYTLIQKMMYPEFANWTIMF 79 (311)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHCTTEEEEEEEECHHHHHHHHHTSCCCCSEEEESSHHHHHHHHTTTTCSCCEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCCCC
T ss_conf 99999615829999999999998885918999968819999999967999998998878999999966997765200
No 17
>d1twya_ c.94.1.1 (A:) ABC transporter, periplasmic substrate-binding protein VCA0807 {Vibrio cholerae [TaxId: 666]}
Probab=97.31 E-value=0.0008 Score=38.92 Aligned_cols=122 Identities=7% Similarity=0.058 Sum_probs=74.0
Q ss_pred CEEEECCCC-HHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 089981899-899999999999875-986210000135667652106665575042233234331000012342223472
Q gi|254780563|r 28 YLTLYTDQN-QSVMLPIIHSFEERT-GVKISPIYTSSIQRPPITQGSPVDVIITKDETSLALNEDLLHKLPAHLIKKNSF 105 (195)
Q Consensus 28 ~lvVYs~~~-~~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~~~~~~~~d~~~~~d~~~l~~~~~~l~~~~~~~~~~~~~ 105 (195)
+|+|-.+.+ ..+++.+.++|++++ |++|++...++.+.+....+..+|+.+....... ++
T Consensus 2 ~i~i~GS~s~~~~~~~l~~~f~~~~p~~~v~v~~~gS~~~~~~l~~g~~di~~~s~~~~~--~e---------------- 63 (249)
T d1twya_ 2 EITISGSTSVARIMDVLAEKYNQQHPETYVAVQGVGSTAGISLLKKGVADIAMTSRYLTE--SE---------------- 63 (249)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHTTSCSEEEESSCCCT--TT----------------
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEECCCCHHH--HH----------------
T ss_conf 699995160999999999999988879379997078579999997599725523421234--54----------------
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEHHHHCC-----------CCCCCCHHHHCCHHHCCEEEECCCCCCHHHHHHHHH
Q ss_conf 0001222223443450588873344013-----------445578888408667685996289830499999999
Q gi|254780563|r 106 VLKNENKKLMRISFDTQVLAYSTKRIKI-----------ADLPKSVFDLTNAQWKKRLSIAPNNISFHRLLNTME 169 (195)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~-----------~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~~~~a~~ 169 (195)
....-...++.....++++|.+--.. ...+++|.|+..|..+..+..++.++..+..+..++
T Consensus 64 --~~~~~~~~~ia~d~lviiv~~~np~~~lt~~ql~~I~~g~i~~W~~~~~~~~~i~~~~r~~~Sgt~~~f~~~~ 136 (249)
T d1twya_ 64 --AQNTLHTFTLAFDGLAIVVNQANPVTNLTREQLYGIYKGQITNWKQVGGNDQKIAVVTREASSGTRYSFESLM 136 (249)
T ss_dssp --CCTTCEEEEEEEEEEEEEECTTCCCCEECHHHHHHHHHTSCCBGGGGTSCSCBCEEEEECTTCHHHHHHHHHH
T ss_pred --HHCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCCHHHHHHHHHH
T ss_conf --2200245788850301223643111225577887645420021233212234442002788830899999997
No 18
>d1j1na_ c.94.1.1 (A:) Alginate-binding periplasmic protein AlgQ2 {Sphingomonas sp. [TaxId: 28214]}
Probab=97.25 E-value=4.2e-05 Score=46.21 Aligned_cols=120 Identities=13% Similarity=0.125 Sum_probs=68.2
Q ss_pred CCCCEEEECCCCHH----HHHHHHHHHHHHCCCCCCCCCHH---HH-HH---HHHHHCCCCCEEEECC-HHH--HHHHHH
Q ss_conf 58808998189989----99999999998759862100001---35-66---7652106665575042-233--234331
Q gi|254780563|r 25 TTKYLTLYTDQNQS----VMLPIIHSFEERTGVKISPIYTS---SI-QR---PPITQGSPVDVIITKD-ETS--LALNED 90 (195)
Q Consensus 25 ~~~~lvVYs~~~~~----~~~~~~~~Fek~tgIkV~~~~~~---~~-~~---~~~~~~~~~d~~~~~d-~~~--l~~~~~ 90 (195)
..-+|++|.+.... ...++.+.+++++||+|+++... .. +. ++.. +...|+++..+ ... .....|
T Consensus 9 ~pvtl~~~~~~~~~~~~~~~~~~~~~~~e~~gikv~~~~~~~~~~~~~kl~~~las-g~~PDii~~~~~~~~~~~~~~~G 87 (492)
T d1j1na_ 9 KPLTLKIHMHFRDKWVWDENWPVAKESFRLTNVKLQSVANKAATNSQEQFNLMMAS-GDLPDVVGGDNLKDKFIQYGQEG 87 (492)
T ss_dssp SCEEEEEEEEETTTEECCTTSHHHHHHHHHHSEEEEECSCTTCCCHHHHHHHHHTS-SCCCSEEEESSCHHHHHHHHHTT
T ss_pred CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHC-CCCCEEEEECCCHHHHHHHHHCC
T ss_conf 98799999846865453326199999735769689999668977899999999978-99787999898469999999889
Q ss_pred HHCCCCCCC----------CCCCCC---CCCCCCCCCCCCCC-----CEEEEEEEHHHHCCC--CCCCCHHHHCC
Q ss_conf 000012342----------223472---00012222234434-----505888733440134--45578888408
Q gi|254780563|r 91 LLHKLPAHL----------IKKNSF---VLKNENKKLMRISF-----DTQVLAYSTKRIKIA--DLPKSVFDLTN 145 (195)
Q Consensus 91 ~l~~~~~~~----------~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~n~~~~~~~--~~P~sw~DL~~ 145 (195)
.+.++..-. ....+. .....+|..+++.. ...++.||++.++.. ++|++|+||.+
T Consensus 88 ~l~dL~d~~~~~~~~~~~~~~~~~~~~~~~~~~dGk~YgiP~~~~~~~~~~~~ynkd~~~~~Gl~~p~t~de~~~ 162 (492)
T d1j1na_ 88 AFVPLNKLIDQYAPHIKAFFKSHPEVERAIKAPDGNIYFIPYVPDGVVARGYFIREDWLKKLNLKPPQNIDELYT 162 (492)
T ss_dssp SBCCCHHHHHHHCHHHHHHHHHCHHHHHHHCCTTSCCCCEEEECCCSCCEEEEEEHHHHHHTTCCCCCBHHHHHH
T ss_pred CEEECHHHHHHHCHHHHHHHHHCHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHCCCCCHHHHH
T ss_conf 989887999761711688887678999971340883999987336763201476189999865420211036999
No 19
>d1p99a_ c.94.1.1 (A:) Putative lipoprotein (NlpA family) {Staphylococcus aureus [TaxId: 1280]}
Probab=90.23 E-value=0.48 Score=23.07 Aligned_cols=56 Identities=5% Similarity=0.006 Sum_probs=30.4
Q ss_pred CEEE-ECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHHHHCCCCCEEEECCHHH
Q ss_conf 0899-818998999999999998759862100001356-67652106665575042233
Q gi|254780563|r 28 YLTL-YTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQ-RPPITQGSPVDVIITKDETS 84 (195)
Q Consensus 28 ~lvV-Ys~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~-~~~~~~~~~~d~~~~~d~~~ 84 (195)
+|+| |++.+......+.+.| ++.|++|+++..++.. ...+..+...|+.+......
T Consensus 1 ~v~ig~~~~~~~~~~~~~~~~-~k~Gl~Ve~~~f~~~~~~~~Al~~G~iD~~~~~~~~~ 58 (255)
T d1p99a_ 1 KVTIGVASNDTKAWEKVKELA-KKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAF 58 (255)
T ss_dssp CEEEEESSSCCHHHHHHHHHH-GGGTCCEEEEECSSTTSHHHHHHTTSSSEEEEEEHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HHCCCEEEEEECCCCHHHHHHHHCCCCCEECCCCHHH
T ss_conf 979997288389999999999-9749879999707804689998759977784578789
No 20
>d2fyia1 c.94.1.1 (A:88-307) LysR-type regulatory protein Cbl {Escherichia coli [TaxId: 562]}
Probab=86.43 E-value=0.86 Score=21.62 Aligned_cols=57 Identities=21% Similarity=0.290 Sum_probs=41.9
Q ss_pred CCCCEEEECCCC--HHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 588089981899--899999999999875-986210000135667652106665575042
Q gi|254780563|r 25 TTKYLTLYTDQN--QSVMLPIIHSFEERT-GVKISPIYTSSIQRPPITQGSPVDVIITKD 81 (195)
Q Consensus 25 ~~~~lvVYs~~~--~~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~~~~~~~~d~~~~~d 81 (195)
.+++|+|-++.. .....+++..|.+++ +|++++..+.+.+.....++...|+.+...
T Consensus 4 ~sG~l~i~~~~~~~~~~Lp~~l~~f~~~~P~i~l~i~~~~~~~~~~~l~~g~~Di~i~~~ 63 (220)
T d2fyia1 4 TSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASE 63 (220)
T ss_dssp CCEEEEEEECHHHHHHTHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHHTSCSEEEESS
T ss_pred CCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 978899998789999999999999999888958999988708899998763433332001
No 21
>d1xs5a_ c.94.1.1 (A:) Putative lipoprotein (NlpA family) {Treponema pallidum [TaxId: 160]}
Probab=84.34 E-value=1.1 Score=21.04 Aligned_cols=58 Identities=3% Similarity=0.007 Sum_probs=32.3
Q ss_pred CCCEEE-ECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHHHHCCCCCEEEECCHH
Q ss_conf 880899-818998999999999998759862100001356-6765210666557504223
Q gi|254780563|r 26 TKYLTL-YTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQ-RPPITQGSPVDVIITKDET 83 (195)
Q Consensus 26 ~~~lvV-Ys~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~-~~~~~~~~~~d~~~~~d~~ 83 (195)
.++|+| |+..+...+-.+++.+=++.||+|+++..++.. ......+...|+.......
T Consensus 2 ~~ti~ig~~~~~~~~~l~~~k~~~k~~Gi~Ve~v~f~~g~~~~~Al~~G~iD~~~~~~~~ 61 (240)
T d1xs5a_ 2 DETVGVGVLSEPHARLLEIAKEEVKKQHIELRIVEFTNYVALNEAVMRGDILMNFFQHVP 61 (240)
T ss_dssp CEEEEEEECSTTHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTSSSEEEEEEHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEECCCCHH
T ss_conf 944999954798099999999999974987999981780668999975996666128778
No 22
>d1ixha_ c.94.1.1 (A:) Phosphate-binding protein {Escherichia coli [TaxId: 562]}
Probab=70.80 E-value=2.8 Score=18.66 Aligned_cols=49 Identities=18% Similarity=0.063 Sum_probs=30.7
Q ss_pred CEEEEC-CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCE
Q ss_conf 089981-8998999999999998759862100001356676521066655
Q gi|254780563|r 28 YLTLYT-DQNQSVMLPIIHSFEERTGVKISPIYTSSIQRPPITQGSPVDV 76 (195)
Q Consensus 28 ~lvVYs-~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~~~~~~d~ 76 (195)
+|+.-. +...-+++.+.++|++++|++|.+..+++..-+....+...|+
T Consensus 3 si~~~GSstv~p~~~~~a~~~~~~~~~~v~~~~~GSg~G~~~~~~g~~di 52 (321)
T d1ixha_ 3 SLTGAGATFPAPVYAKWADTYQKETGNKVNYQGIGSSGGVKQIIANTVDF 52 (321)
T ss_dssp EEEEEECSTTHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHTTCSSE
T ss_pred EEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEE
T ss_conf 49997162699999999999998579868997247699999997499839
No 23
>d1utha_ c.94.1.1 (A:) LysR-type regulatory protein DntR {Burkholderia sp. [TaxId: 36773]}
Probab=64.14 E-value=3.9 Score=17.88 Aligned_cols=61 Identities=15% Similarity=0.183 Sum_probs=42.9
Q ss_pred CCCCCCCEEEECCCC--HHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCEEEECCH
Q ss_conf 444588089981899--899999999999875-9862100001356676521066655750422
Q gi|254780563|r 22 TENTTKYLTLYTDQN--QSVMLPIIHSFEERT-GVKISPIYTSSIQRPPITQGSPVDVIITKDE 82 (195)
Q Consensus 22 ~~~~~~~lvVYs~~~--~~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~~~~~~~~d~~~~~d~ 82 (195)
-+...++++|..+.+ .....+++..|.+++ +|++++......+......+...|+.+....
T Consensus 7 P~~~~~~~rI~~~~~~~~~~lp~ll~~f~~~~P~v~l~i~~~~~~~~~~~l~~g~~D~~i~~~~ 70 (219)
T d1utha_ 7 PFASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLLP 70 (219)
T ss_dssp TTTCCCEEEEECCHHHHHHHHHHHHHHHHHHCTTCEEEEECTTSSCHHHHHHHTSCCEEEECCT
T ss_pred CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEECC
T ss_conf 5636978999972799999999999999998899889999555787999986488405664124
No 24
>d2esna2 c.94.1.1 (A:92-303) Probable LysR-type transcriptional regulator PA0477 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=62.91 E-value=4.1 Score=17.74 Aligned_cols=59 Identities=8% Similarity=0.242 Sum_probs=41.1
Q ss_pred CCCCCCEEEECCC--CHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 4458808998189--9899999999999875-986210000135667652106665575042
Q gi|254780563|r 23 ENTTKYLTLYTDQ--NQSVMLPIIHSFEERT-GVKISPIYTSSIQRPPITQGSPVDVIITKD 81 (195)
Q Consensus 23 ~~~~~~lvVYs~~--~~~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~~~~~~~~d~~~~~d 81 (195)
+...++++|-.+. ......+++..|.+++ +|++++..+...+.....+....|+.++..
T Consensus 4 ~~~~~~~rI~~~~~~~~~~lp~ll~~f~~~~P~v~i~l~~~~~~~~~~~l~~g~~Dl~i~~~ 65 (212)
T d2esna2 4 GQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLSVEALASGRIDFALGYD 65 (212)
T ss_dssp TTCCCEEEEECCHHHHHHHHHHHHHHHHHHSTTCEEEEECCSSSCCHHHHHHTSSSEEEECC
T ss_pred CCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCC
T ss_conf 74786899997579999999999999999889968999954748999999972345442211
No 25
>d1pc3a_ c.94.1.1 (A:) Phosphate-binding protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=60.90 E-value=4.5 Score=17.53 Aligned_cols=54 Identities=17% Similarity=0.046 Sum_probs=33.5
Q ss_pred CCCCCCEEEECC-CCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCE
Q ss_conf 445880899818-99899999999999875-9862100001356676521066655
Q gi|254780563|r 23 ENTTKYLTLYTD-QNQSVMLPIIHSFEERT-GVKISPIYTSSIQRPPITQGSPVDV 76 (195)
Q Consensus 23 ~~~~~~lvVYs~-~~~~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~~~~~~~~d~ 76 (195)
.....+|++-.+ ...-+++.+.++|.+++ +++|++..+++..-...-.....|+
T Consensus 6 ~~~~~~l~~~GSst~~p~~~~~a~~y~~~~~~~~v~~~~~GSg~G~~~~~~g~~di 61 (333)
T d1pc3a_ 6 ASSPVTLAETGSTLLYPLFNLWGPAFHERYPNVTITAQGTGSGAGIAQAAAGTVNI 61 (333)
T ss_dssp CSSCEEEEEEECTTTHHHHHHHHHHHHHHSTTEEEECCBCCHHHHHHHHHTTSCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCE
T ss_conf 78885699975366999999999999988889069996267689999997599938
No 26
>d2v3qa1 c.94.1.1 (A:1-376) PstS-like phosphate-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.64 E-value=3.7 Score=18.02 Aligned_cols=25 Identities=12% Similarity=-0.205 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 9999999998759862100001356
Q gi|254780563|r 40 MLPIIHSFEERTGVKISPIYTSSIQ 64 (195)
Q Consensus 40 ~~~~~~~Fek~tgIkV~~~~~~~~~ 64 (195)
+.+++..+.+++|++|+|...++..
T Consensus 10 p~p~~~~~~~~~~~~~~y~~~GSG~ 34 (376)
T d2v3qa1 10 PQKLYLTPDVLTAGFAPYIGVGSGK 34 (376)
T ss_dssp THHHHTSTTTSCTTBCCCEECCHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCHH
T ss_conf 9999999876359678995657689
No 27
>d1ixca2 c.94.1.1 (A:90-294) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=46.46 E-value=7.8 Score=16.16 Aligned_cols=53 Identities=9% Similarity=0.039 Sum_probs=35.3
Q ss_pred CEEEE--CCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 08998--1899899999999999875-98621000013566765210666557504
Q gi|254780563|r 28 YLTLY--TDQNQSVMLPIIHSFEERT-GVKISPIYTSSIQRPPITQGSPVDVIITK 80 (195)
Q Consensus 28 ~lvVY--s~~~~~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~~~~~~~~d~~~~~ 80 (195)
+|.|= ++.......+++.+|.+++ +|+|++..+.+.+..........|+.+..
T Consensus 3 ~lrIg~~~~~~~~~Lp~~l~~f~~~~P~v~l~i~~~~~~~l~~~l~~g~~D~~~~~ 58 (205)
T d1ixca2 3 ELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSR 58 (205)
T ss_dssp EEEEEECSGGGGTHHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHHTSCSEEEES
T ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCC
T ss_conf 89999896889999999999999988796899998877442011022220322123
No 28
>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}
Probab=40.46 E-value=9.7 Score=15.61 Aligned_cols=54 Identities=15% Similarity=0.111 Sum_probs=35.1
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 588089981899899999999999875986210000135667652106665575
Q gi|254780563|r 25 TTKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRPPITQGSPVDVII 78 (195)
Q Consensus 25 ~~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~~~~~~d~~~ 78 (195)
..+.-+|.+..-+.....+++.+-++.||++.++.....+.....-.....+++
T Consensus 96 ~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~~d~~~~~~ai~~~t~lv~ 149 (392)
T d1gc0a_ 96 RPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIY 149 (392)
T ss_dssp CTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEE
T ss_pred CCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 699800012111101455643210247742245786679999984787875999
No 29
>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}
Probab=35.69 E-value=12 Score=15.17 Aligned_cols=54 Identities=4% Similarity=-0.012 Sum_probs=35.0
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 588089981899899999999999875986210000135667652106665575
Q gi|254780563|r 25 TTKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRPPITQGSPVDVII 78 (195)
Q Consensus 25 ~~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~~~~~~d~~~ 78 (195)
.++.-+|.+..-+.....+++.+-++.||++.++...+.+...+.-.....++|
T Consensus 100 ~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~~d~~~~~~~i~~~Tklv~ 153 (397)
T d1y4ia1 100 QQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAGKPEEIRAAMRPETKVVY 153 (397)
T ss_dssp CTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEE
T ss_pred CCCCEEEEECCCCCCCCHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCEEE
T ss_conf 899865430101233103543136778557541489998999986587773898
No 30
>d1itwa_ c.77.1.2 (A:) Monomeric isocitrate dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Probab=30.54 E-value=14 Score=14.67 Aligned_cols=33 Identities=27% Similarity=0.508 Sum_probs=24.4
Q ss_pred EEEECCCCHHH------HHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 89981899899------9999999998759862100001
Q gi|254780563|r 29 LTLYTDQNQSV------MLPIIHSFEERTGVKISPIYTS 61 (195)
Q Consensus 29 lvVYs~~~~~~------~~~~~~~Fek~tgIkV~~~~~~ 61 (195)
-+|||-.++.. .-|++++|.+..||.|+...-+
T Consensus 4 ~IiyT~tDEAPaLAT~SlLPIi~aF~~~agi~ve~~DIS 42 (740)
T d1itwa_ 4 KIIYTLTDEAPALATYSLLPIIKAFTGSSGIAVETRDIS 42 (740)
T ss_dssp EEEEEECSHHHHHHHHHHHHHHHHHHHTTTCEEEEEECS
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 068952762687777767899999631408747620055
No 31
>d1al3a_ c.94.1.1 (A:) Cofactor-binding fragment of LysR-type protein CysB {Klebsiella aerogenes [TaxId: 28451]}
Probab=29.80 E-value=15 Score=14.60 Aligned_cols=56 Identities=20% Similarity=0.157 Sum_probs=37.8
Q ss_pred CCCCEEEECCC--CHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 58808998189--9899999999999875-98621000013566765210666557504
Q gi|254780563|r 25 TTKYLTLYTDQ--NQSVMLPIIHSFEERT-GVKISPIYTSSIQRPPITQGSPVDVIITK 80 (195)
Q Consensus 25 ~~~~lvVYs~~--~~~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~~~~~~~~d~~~~~ 80 (195)
..++|.|=+.. ......+++.+|.+++ +|+|++..+.+.+......+...|+.+..
T Consensus 4 ~~G~LrIg~~~~~~~~~LP~~l~~f~~~~P~v~v~l~~~~~~~l~~~l~~g~~D~ai~~ 62 (237)
T d1al3a_ 4 DKGSLYVATTHTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIAT 62 (237)
T ss_dssp CEEEEEEEECHHHHHHTSHHHHHHHHHHCTEEEEEEEECCHHHHHHHHHTTCCSEEEES
T ss_pred CCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEEE
T ss_conf 96789999678899999999999999988891899998987999999743377689996
No 32
>d1a9xb1 c.8.3.1 (B:1502-1652) Carbamoyl phosphate synthetase, small subunit N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.02 E-value=16 Score=14.40 Aligned_cols=24 Identities=13% Similarity=0.368 Sum_probs=16.2
Q ss_pred EEEEHHHHCCCCCCCCHHH-HCCHHHCCEEEE
Q ss_conf 8873344013445578888-408667685996
Q gi|254780563|r 124 LAYSTKRIKIADLPKSVFD-LTNAQWKKRLSI 154 (195)
Q Consensus 124 ~~~n~~~~~~~~~P~sw~D-L~~p~~kG~i~~ 154 (195)
+++||- -+.|.+ |+||.|.|+|.+
T Consensus 29 ~vFnT~-------mtGYqE~lTDPSY~gQii~ 53 (151)
T d1a9xb1 29 VVFNTS-------MTGYQEILTDPSYSRQIVT 53 (151)
T ss_dssp EEEECC-------SSCHHHHHTCGGGBTEEEE
T ss_pred EEEEEC-------CCCHHHHCCCCCCCCCEEE
T ss_conf 999704-------0004445047770683289
No 33
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}
Probab=21.39 E-value=19 Score=13.89 Aligned_cols=29 Identities=17% Similarity=0.301 Sum_probs=14.1
Q ss_pred EECCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 98189989999999999987598621000
Q gi|254780563|r 31 LYTDQNQSVMLPIIHSFEERTGVKISPIY 59 (195)
Q Consensus 31 VYs~~~~~~~~~~~~~Fek~tgIkV~~~~ 59 (195)
+.++++.+-.+...+++.+++|.++..+.
T Consensus 53 ii~~r~~~~l~~~~~~l~~~~g~~~~~~~ 81 (294)
T d1w6ua_ 53 VIASRKMDVLKATAEQISSQTGNKVHAIQ 81 (294)
T ss_dssp EEEESCHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 99979888999999999974299628998
No 34
>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}
Probab=21.13 E-value=22 Score=13.64 Aligned_cols=45 Identities=9% Similarity=-0.051 Sum_probs=31.8
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 588089981899899999999999875986210000135667652
Q gi|254780563|r 25 TTKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRPPIT 69 (195)
Q Consensus 25 ~~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~ 69 (195)
..+.-+|.+..-+.....+++.+-++.||++.++...+.+.....
T Consensus 35 ~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~~d~~~~~~~ 79 (331)
T d1pffa_ 35 KAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKH 79 (331)
T ss_dssp CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHH
T ss_conf 999999992897517999999999865958999645423667653
Done!