RPSBLAST alignment of GI: 254780563 and SCOP domain: d1y9ua_

Alignment

 Score = 46.3 bits (108), Expect = 2e-06
 Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 3/143 (2%)

Query: 29  LTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSS--IQRPPITQG-SPVDVIITKDETSL 85
           ++LYT +   ++ P++ +F + +G+K++ ++     ++R       SP DV++T D  +L
Sbjct: 3   VSLYTTREPKLIQPLLDAFAKDSGIKVNTVFVKDGLLERVRAEGDKSPADVLMTVDIGNL 62

Query: 86  ALNEDLLHKLPAHLIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTN 145
               +            +S V  N           +           +        DL +
Sbjct: 63  IDLVNGGVTQKIQSQTLDSVVPANLRGAEGSWYALSLRDRVLYVEKDLKLDSFRYGDLAD 122

Query: 146 AQWKKRLSIAPNNISFHRLLNTM 168
            +WK ++ I      ++  L   
Sbjct: 123 PKWKGKVCIRSGQHPYNTALVAA 145

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Ferric-binding protein FbpA
species: Bordetella pertussis [TaxId: 520]