HHsearch alignment for GI: 254780564 and conserved domain: COG0687

>COG0687 PotD Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism].

Probab=98.20  E-value=6e-06  Score=52.85  Aligned_cols=62  Identities=29%  Similarity=0.385  Sum_probs=53.3

Q ss_pred             CCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCC
Q ss_conf             4878535504658998510686541216316998899999999983999999997400210010687
Q gi|254780564|r   13 HHSEVSVSYTPFLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGI   79 (107)
Q Consensus        13 ~~~~~~v~~~~f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV   79 (107)
T Consensus       253 ~~~~i~~~~----p~e-G~~~w~D~~~ipk~a~n~~~A~~fInf~~~pe~~a~~~~~~~y~~~n~~a  314 (363)
T COG0687         253 NGAPIEFVI----PKE-GSILWFDNLAIPKGAKNVDAAYKFINFLLDPEVAAKLAEFVGYAPPNKAA  314 (363)
T ss_pred             CCCEEEEEC----CCC-CCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHH
T ss_conf             898057734----788-73478788998799999899999999851989999998732678888777