HHsearch alignment for GI: 254780564 and conserved domain: COG1840
>COG1840 AfuA ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism].
Probab=99.54 E-value=2.7e-14 Score=97.92 Aligned_cols=97 Identities=22% Similarity=0.167 Sum_probs=78.9
Q ss_pred CCCHHH--HHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCC--CCHHC
Q ss_conf 944789--99985148785355046589985106865412163169988999999999839999999974002--10010
Q gi|254780564|r 1 MINASS--VAIFKNHHSEVSVSYTPFLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALG--EYPII 76 (107)
Q Consensus 1 ~~n~yy--~~~~k~~~~~~~v~~~~f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~--eyPv~ 76 (107)
T Consensus 180 ~~~~~~~~~~~~~~~~~~v~iv~----P~~-G~~v~~~~vaiik~a~~~e~Ak~fid~llS~egQ~~~~~~~~~~~~~~~ 254 (299)
T COG1840 180 LGNLYYGAYAKDKAKGAPVEVVY----PEE-GTGVNPSGVALLKKAKNPEAAKLFIDFLLSKEGQEILAKKGYSPEIPVN 254 (299)
T ss_pred EEECCHHHHHHHHCCCCCEEEEE----CCC-CCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
T ss_conf 87210799997514698569994----898-8689754355434899989999999998089889999841757667888
Q ss_pred CCCCCCCCCCCCC---CCCCCCCCHHHHH
Q ss_conf 6876742101255---4472565865786
Q gi|254780564|r 77 KGIITNRKFNDQT---YTNRESFELIKTA 102 (107)
Q Consensus 77 ~gV~~~~~~~~~~---~~~~d~~~l~~~a 102 (107)
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (299)
T COG1840 255 PKAEDSPAALDFADLIALDFETLGKLLEA 283 (299)
T ss_pred CCCCCCCCCCCCHHCCCCCHHHHHHHHHH
T ss_conf 87666742015022024584430035788