HHsearch alignment for GI: 254780564 and conserved domain: TIGR00971
>TIGR00971 3a0106s03 sulfate ABC transporter, sulfate-binding protein; InterPro: IPR005669 Thiosulphate-binding proteins (gene cysP) specifically binds thiosulphate and are involved in the transport systems for this nutrients , . There are two conserved regions in the protein, one located in the N-terminal region and the other in the central part of these proteins. The second pattern includes two adjacent amino acids (Ser-Gly) that, in sbp, are known to be essential for sulphate binding . ; GO: 0015419 sulfate transmembrane-transporting ATPase activity, 0008272 sulfate transport, 0030288 outer membrane-bounded periplasmic space.
Probab=90.23 E-value=0.19 Score=28.51 Aligned_cols=77 Identities=19% Similarity=0.213 Sum_probs=42.3
Q ss_pred HCCCCCCEEECCCCCCCCCCEEEEEEEE---EECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCC--CCCCC
Q ss_conf 1487853550465899851068654121---631699889999999998399999999740021001068767--42101
Q gi|254780564|r 12 NHHSEVSVSYTPFLPKDIGNILCSTVGG---IAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIIT--NRKFN 86 (107)
Q Consensus 12 ~~~~~~~v~~~~f~~~D~G~~v~vsgag---I~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~--~~~~~ 86 (107)
T Consensus 216 ~~~~~FE~V~----P~~-~ILAE~~V~~VDK~V~~~~T~~~A~AYL~yLYSP~~Q~I~~~~-yYR~~~~~v~~K~~~~FP 289 (320)
T TIGR00971 216 LEKDKFEIVI----PSE-SILAEPTVSVVDKVVEKKGTKKVAEAYLKYLYSPEGQEIIAKN-YYRVRDAEVAKKYEDKFP 289 (320)
T ss_pred HCCCCCEEEC----CCC-CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHC-CCCCCCHHHHHHHHCCCC
T ss_conf 3348726864----774-3213565035743303234589999999740494135676542-678888889867751688
Q ss_pred CCCCCCCC
Q ss_conf 25544725
Q gi|254780564|r 87 DQTYTNRE 94 (107)
Q Consensus 87 ~~~~~~~d 94 (107)
T Consensus 290 ~~~LF~~~ 297 (320)
T TIGR00971 290 KLKLFTID 297 (320)
T ss_pred CCEEEEEE
T ss_conf 60234672