HHsearch alignment of GI: 254780564 and MMDB domain: 1hsj_A_1-112_253-309

>1hsj_A (A:1-112,A:253-309) Fusion protein consisting of staphylococcus accessary regulator protein R and maltose...; novel fold for DNA binding; HET: GLC; 2.30A {Escherichia coli}
Probab=96.58  E-value=0.0027  Score=38.18  Aligned_cols=51  Identities=20%  Similarity=0.210  Sum_probs=42.0

Q ss_pred             CCCCCEEEEEEEEEECCCCCHHHHHHHHH-HHHCHHHHHHHHHHCC-CCHHCC
Q ss_conf             98510686541216316998899999999-9839999999974002-100106
Q gi|254780564|r   27 KDIGNILCSTVGGIAESSKKKSVATQFLR-FLLLPIVQQYIATALG-EYPIIK   77 (107)
Q Consensus        27 ~D~G~~v~vsgagI~k~a~n~~~A~kfie-fLlS~e~Q~~~a~~~~-eyPv~~   77 (107)
                      +.+-.+|=+-|++|-..|+|+++|++||+ ||+++|+|..+-+... +-|.++
T Consensus       113 ~~~~~f~gv~~~~~~~~s~n~~~a~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (169)
T 1hsj_A          113 QPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALK  165 (169)
T ss_dssp             BCCCCCBEEEEEEEBSSCSCHHHHHHHHHHTTTSHHHHHHHHHHSCCCEESBH
T ss_pred             CCCCEECCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
T ss_conf             87622214230343079968999999999996799999999981798875443