HHsearch alignment of GI: 254780564 and MMDB domain: 1q35_A_
>1q35_A (A:) Iron binding protein FBPA; metal binding protein; 1.20A {Mannheimia haemolytica}
Probab=99.16 E-value=9.5e-11 Score=78.42 Aligned_cols=102 Identities=19% Similarity=0.146 Sum_probs=83.5
Q ss_pred HHHHHHHHCCCCCC---EEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCC
Q ss_conf 89999851487853---550465899851068654121631699889999999998399999999740021001068767
Q gi|254780564|r 5 SSVAIFKNHHSEVS---VSYTPFLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIIT 81 (107)
Q Consensus 5 yy~~~~k~~~~~~~---v~~~~f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~ 81 (107)
+..+.+........ ...+++.....|+.+...+.+|.++|+|+++|.+||+||+|+|+|+.+++.....|+++++..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~aA~~fi~~l~s~e~q~~~~~~~g~~P~~~~~~~ 277 (320)
T 1q35_A 198 YYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGIEP 277 (320)
T ss_dssp HHHHHHHHSTTTHHHHHTEEEECCCSTTCBEEEEEEEEEBTTCTTHHHHHHHHHHHHSHHHHHHHHHHHCCEESSTTCCC
T ss_pred EEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCCC
T ss_conf 32023566667766521674212334477258742578766899889999999996299999999972652017889999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 4210125544725658657863078
Q gi|254780564|r 82 NRKFNDQTYTNRESFELIKTAQNPP 106 (107)
Q Consensus 82 ~~~~~~~~~~~~d~~~l~~~a~n~p 106 (107)
++.++++...+.+..+...++.+.|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (320)
T 1q35_A 278 SAIVKGWGTFKSDTIKLEDIAKNYE 302 (320)
T ss_dssp CHHHHHTCCCCBCCCCHHHHHTTHH
T ss_pred CHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9123564436877789999987569