HHsearch results for GI: 254780564 and protein with PDBid: 1a99_A

>1a99_A POTF, putrescine-binding protein; transport, periplasmic putrescine binding protein (POTF); 2.20A {Escherichia coli} SCOP: c.94.1.1

Probab=98.86  E-value=3.8e-09  Score=68.91  Aligned_cols=57  Identities=28%  Similarity=0.288  Sum_probs=51.6

Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCC
Q ss_conf             5899851068654121631699889999999998399999999740021001068767
Q gi|254780564|r   24 FLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIIT   81 (107)
Q Consensus        24 f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~   81 (107)
                      ..|.+ |++..+.+.+|.|+|+|+++|.+||+||+|+++|+.+++.++..|+++++..
T Consensus       241 ~~p~~-G~~~~~~~~~I~k~s~~~e~A~~fi~~l~s~e~q~~~~~~~g~~p~~~~a~~  297 (344)
T 1a99_A          241 SIPKE-GAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATP  297 (344)
T ss_dssp             ECCTT-CEEEEEEEEECBTTCSCHHHHHHHHHHHHSHHHHHHHHHHHCCEESBTTTGG
T ss_pred             ECCCC-CCEECCCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             33888-7434043110018999879999999996599999999997488882677886