HHSEARCH alignment of GI: 254780564 and SCOP domain: d1elja_

Alignment

Probab=98.24  E-value=5.1e-07  Score=56.18  Aligned_cols=83  Identities=17%  Similarity=0.147  Sum_probs=59.5

Q ss_pred             HHHHHHHHHCCCCCCEEECCCCC-CC----CCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHH-HHHHHHCCCCHHCC
Q ss_conf             78999985148785355046589-98----51068654121631699889999999998399999-99974002100106
Q gi|254780564|r    4 ASSVAIFKNHHSEVSVSYTPFLP-KD----IGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQ-QYIATALGEYPIIK   77 (107)
Q Consensus         4 ~yy~~~~k~~~~~~~v~~~~f~~-~D----~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q-~~~a~~~~eyPv~~   77 (107)
                      .+.+..++..+.++++...|..+ ++    .+......+.+|.++++|+++|.+||+||+|++.| +.+.......|+.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~s~~~e~A~~fi~~l~s~e~~~~~~~~~~g~~P~~~  308 (380)
T d1elja_         229 PWSINDVKKAGINFGVVPLPPIIKDGKEYWPRPYGGVKLIYFAAGIKNKDAAWKFAKWLTTSEESIKTLALELGYIPVLT  308 (380)
T ss_dssp             GGGHHHHHHTTCCEEEECCCCEEETTEEECCCCEEEEEEEEEBTTCSCHHHHHHHHHHHHHCHHHHHHHHHHHCCBCCBG
T ss_pred             HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf             28899987543026644458878776666652211000011244674599999999986326999999998348888777


Q ss_pred             CCCCCCCCC
Q ss_conf             876742101
Q gi|254780564|r   78 GIITNRKFN   86 (107)
Q Consensus        78 gV~~~~~~~   86 (107)
                      .+..+..+.
T Consensus       309 ~~~~~~~~~  317 (380)
T d1elja_         309 KVLDDPEIK  317 (380)
T ss_dssp             GGGGCHHHH
T ss_pred             HHHHCHHHH
T ss_conf             788598755

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: D-maltodextrin-binding protein, MBP
species: Archaeon Pyrococcus furiosus [TaxId: 2261]