HHSEARCH alignment of GI: 254780564 and SCOP domain: d1q35a_

Alignment

Probab=99.73  E-value=2.7e-18  Score=117.09  Aligned_cols=81  Identities=21%  Similarity=0.176  Sum_probs=76.7

Q ss_pred             CCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf             99851068654121631699889999999998399999999740021001068767421012554472565865786307
Q gi|254780564|r   26 PKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIITNRKFNDQTYTNRESFELIKTAQNP  105 (107)
Q Consensus        26 ~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~~~~~~~~~~~~~d~~~l~~~a~n~  105 (107)
                      ....|+++.+.++||+|+++|+++|++||+||+|+|+|+.+++.+++|||+++|.+++.+++|+.++++.+++..+++++
T Consensus       222 ~~~~G~~~~~~~~~i~k~a~~~~~A~~fi~fllspe~Q~~~a~~~~~~Pv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (318)
T d1q35a_         222 SGEHGTHKNISGVVIAKHSPNKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGIEPSAIVKGWGTFKSDTIKLEDIAKNY  301 (318)
T ss_dssp             CSTTCBEEEEEEEEEBTTCTTHHHHHHHHHHHHSHHHHHHHHHHHCCEESSTTCCCCHHHHHTCCCCBCCCCHHHHHTTH
T ss_pred             CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf             34565312110378978999879999999997499999999851643117889998922346554687778899998636


Q ss_pred             C
Q ss_conf             8
Q gi|254780564|r  106 P  106 (107)
Q Consensus       106 p  106 (107)
                      +
T Consensus       302 ~  302 (318)
T d1q35a_         302 E  302 (318)
T ss_dssp             H
T ss_pred             H
T ss_conf             9

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Ferric-binding protein FbpA
species: Mannheimia haemolytica [TaxId: 75985]