HHsearch alignment for GI: 254780567 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=99.08 E-value=1.8e-08 Score=72.01 Aligned_cols=202 Identities=22% Similarity=0.232 Sum_probs=126.3
Q ss_pred CCCCCCCCEEECCCH-----HHHHHHHHHHHC-------CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 766884541653618-----999999985101-------67884999878777868899999986276201356764445
Q gi|254780567|r 35 CLGISRDDLLVHSAI-----EQAVRLIDSWPS-------WPSRVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDS 102 (246)
Q Consensus 35 ~~~~~~dnFiv~~~N-----~~A~~~i~~~~~-------~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~ 102 (246)
T Consensus 236 ~~~v~~~dig-gl~~~k~~l~e~v~~~~~~~e~~~~~~~~~~~giLl~GpPGtGKT~lAkava~~~~~~fi~v~~~~l~s 314 (494)
T COG0464 236 DEDVTLDDIG-GLEEAKEELKEAIETPLKRPELFRKLGLRPPKGVLLYGPPGTGKTLLAKAVALESRSRFISVKGSELLS 314 (494)
T ss_pred CCCCEEEEEC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHH
T ss_conf 6885145323-637799999999999997088763258988836999889997589999998754498248843355540
Q ss_pred ------------HH----HHHHHHHHHHHHHCCCCCC---------H---HHHHHHHHHHCCCCCEEEEECCCCCCHHHH
Q ss_conf ------------46----6666653343321003761---------0---335455543112342156403543200223
Q gi|254780567|r 103 ------------IL----IDTRKPVLLEDIDLLDFND---------T---QLFHIINSIHQYDSSLLMTARTFPVSWGVC 154 (246)
Q Consensus 103 ------------~~----~~~~~~i~iddi~~~~~~e---------e---~lf~l~n~~~~~~~~iilts~~~p~~~~~~ 154 (246)
T Consensus 315 k~vGesek~ir~~F~~A~~~~p~iifiDEiDs~~~~r~~~~~~~~~rv~~~ll~~~d~~e~~~~v~vi~aTN~p~~ld~a 394 (494)
T COG0464 315 KWVGESEKNIRELFEKARKLAPSIIFIDEIDSLASGRGPSEDGSGRRVVGQLLTELDGIEKAEGVLVIAATNRPDDLDPA 394 (494)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHH
T ss_conf 77659999999999999966998897488666741289987637999999999997475443764899647983326875
Q ss_pred HHHHH-HHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHCC--C
Q ss_conf 45667-885212224507889789999999986662897-98899999994066-7989999999999999998477--8
Q gi|254780567|r 155 LPDLC-SRLKAATVVKISLPDDDFLEKVIVKMFADRQIF-IDKKLAAYIVQRME-RSLVFAEKLVDKMDNLALSRGM--G 229 (246)
Q Consensus 155 l~DL~-SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~-l~~~v~~yl~~r~~-Rs~~~l~~~l~~Ld~~sl~~kr--~ 229 (246)
T Consensus 395 ~--lR~gRfd--~~i~v~~pd~~~r~~i~~~~~~~~~~~~~~~~~~~~l~~~t~~~sgadi~~i~~ea~~~~~~~~~~~~ 470 (494)
T COG0464 395 L--LRPGRFD--RLIYVPLPDLEERLEIFKIHLRDKKPPLAEDVDLEELAEITEGYSGADIAALVREAALEALREARRRE 470 (494)
T ss_pred H--HCCCCCE--EEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 6--2436630--37871798989999999998541565115564199999875277899999999999998998545776
Q ss_pred CCHHHHHHHHHH
Q ss_conf 788999999986
Q gi|254780567|r 230 ITRSLAAEVLKE 241 (246)
Q Consensus 230 ITi~lvk~vL~~ 241 (246)
T Consensus 471 ~~~~~~~~a~~~ 482 (494)
T COG0464 471 VTLDDFLDALKK 482 (494)
T ss_pred CCHHHHHHHHHH
T ss_conf 349999999862