HHsearch alignment for GI: 254780567 and conserved domain: COG0466
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=98.47 E-value=1.4e-06 Score=60.30 Aligned_cols=172 Identities=18% Similarity=0.212 Sum_probs=102.3
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH-----------------HH-------HHHHHHHHHHHHC
Q ss_conf 78849998787778688999999862762013567644454-----------------66-------6666533433210
Q gi|254780567|r 63 PSRVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDSI-----------------LI-------DTRKPVLLEDIDL 118 (246)
Q Consensus 63 ~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~~-----------------~~-------~~~~~i~iddi~~ 118 (246)
T Consensus 349 kGpILcLVGPPGVGKTSLgkSIA~al~RkfvR~sLGGvrDEAEIRGHRRTYIGaMPGrIiQ~mkka~~~NPv~LLDEIDK 428 (782)
T COG0466 349 KGPILCLVGPPGVGKTSLGKSIAKALGRKFVRISLGGVRDEAEIRGHRRTYIGAMPGKIIQGMKKAGVKNPVFLLDEIDK 428 (782)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHH
T ss_conf 88579997899887011899999995897799954765427775355312335687289999998677687478640333
Q ss_pred CCCCC-----HHHH-------------HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHH
Q ss_conf 03761-----0335-------------45554311234215640354320022345667885212224507889789999
Q gi|254780567|r 119 LDFND-----TQLF-------------HIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEK 180 (246)
Q Consensus 119 ~~~~e-----e~lf-------------~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~ 180 (246)
T Consensus 429 m~ss~rGDPaSALLEVLDPEQN~~F~DhYLev~yDL-S~VmFiaTAN--sl~tIP~PLlDRME---iI~lsgYt~~EKl~ 502 (782)
T COG0466 429 MGSSFRGDPASALLEVLDPEQNNTFSDHYLEVPYDL-SKVMFIATAN--SLDTIPAPLLDRME---VIRLSGYTEDEKLE 502 (782)
T ss_pred CCCCCCCCHHHHHHHHCCHHHCCCHHHCCCCCCCCH-HHEEEEEECC--CCCCCCHHHHCCEE---EEEECCCCHHHHHH
T ss_conf 167777886888886269765676122201676644-3258886037--51329867843030---56426888699999
Q ss_pred HHHHHH-----HHC-----CCCCCHHHHHHHHHCCCCCH--HHHHHHHHHHHHHHHHH----C--C--CCCHHHHHHHHH
Q ss_conf 999986-----662-----89798899999994066798--99999999999999984----7--7--878899999998
Q gi|254780567|r 181 VIVKMF-----ADR-----QIFIDKKLAAYIVQRMERSL--VFAEKLVDKMDNLALSR----G--M--GITRSLAAEVLK 240 (246)
Q Consensus 181 il~k~~-----~~r-----~i~l~~~v~~yl~~r~~Rs~--~~l~~~l~~Ld~~sl~~----k--r--~ITi~lvk~vL~ 240 (246)
T Consensus 503 IAk~~LiPk~~~~~gL~~~el~i~d~ai~~iI~~YTREAGVR~LeR~i~ki~RK~~~~i~~~~~k~~~~i~~~~l~~yLG 582 (782)
T COG0466 503 IAKRHLIPKQLKEHGLKKGELTITDEAIKDIIRYYTREAGVRNLEREIAKICRKAAKKILLKKEKSIVKIDEKNLKKYLG 582 (782)
T ss_pred HHHHHCCHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHC
T ss_conf 99984456899975998233556589999999987676210389999999999999999725756624427889999739