HHsearch alignment for GI: 254780567 and conserved domain: COG0593
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=100.00 E-value=0 Score=365.02 Aligned_cols=224 Identities=21% Similarity=0.279 Sum_probs=202.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC---CCEEEEECCCCCCHHHHHHHHHHHHC-----CCCH
Q ss_conf 481034155888776688454165361899999998510167---88499987877786889999998627-----6201
Q gi|254780567|r 22 KNKEEQLFFSFPRCLGISRDDLLVHSAIEQAVRLIDSWPSWP---SRVVILVGPSGSGKSCLANIWSDKSR-----STRF 93 (246)
Q Consensus 22 ~~~~~Ql~l~~~~~~~~~~dnFiv~~~N~~A~~~i~~~~~~~---~~~l~i~G~~GsGKTHLl~a~~~~~~-----~~~~ 93 (246)
T Consensus 68 ~~~~~q~~~~~~l~~~ytFdnFv~g~~N~~A~aa~~~va~~~g~~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~ 147 (408)
T COG0593 68 ASAPAQLPLPSGLNPKYTFDNFVVGPSNRLAYAAAKAVAENPGGAYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVV 147 (408)
T ss_pred CCCCCCCCCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 55531356655689888554220477449999999998756688689579987999978999999999998629986488
Q ss_pred HHHHHHHHHHHHH--------------HHHHHHHHHHHCCCCC---CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 3567644454666--------------6665334332100376---1033545554311234215640354320022345
Q gi|254780567|r 94 SNIAKSLDSILID--------------TRKPVLLEDIDLLDFN---DTQLFHIINSIHQYDSSLLMTARTFPVSWGVCLP 156 (246)
Q Consensus 94 ~~~~~~~~~~~~~--------------~~~~i~iddi~~~~~~---ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~ 156 (246)
T Consensus 148 y~~se~f~~~~v~a~~~~~~~~Fk~~y~~dlllIDDiq~l~gk~~~qeefFh~FN~l~~~~kqIvltsdr~P~~l~~~~~ 227 (408)
T COG0593 148 YLTSEDFTNDFVKALRDNEMEKFKEKYSLDLLLIDDIQFLAGKERTQEEFFHTFNALLENGKQIVLTSDRPPKELNGLED 227 (408)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCH
T ss_conf 50489989999999885048888876426735551386756771579999999998885088799970788322110358
Q ss_pred HHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 66788521222450788978999999998666289798899999994066798999999999999999847787889999
Q gi|254780567|r 157 DLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAA 236 (246)
Q Consensus 157 DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk 236 (246)
T Consensus 228 rL~SR~~~Gl~~~I~~Pd~e~r~aiL~kka~~~~~~i~~ev~~~la~~~~~nvReLegaL~~l~~~a~~~~~~iTi~~v~ 307 (408)
T COG0593 228 RLRSRLEWGLVVEIEPPDDETRLAILRKKAEDRGIEIPDEVLEFLAKRLDRNVRELEGALNRLDAFALFTKRAITIDLVK 307 (408)
T ss_pred HHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 89989863057752798889999999999986588888799999999700309999999999999998538757699999
Q ss_pred HHHHHHHCC
Q ss_conf 999867418
Q gi|254780567|r 237 EVLKETQQC 245 (246)
Q Consensus 237 ~vL~~~~~~ 245 (246)
T Consensus 308 e~L~~~~~~ 316 (408)
T COG0593 308 EILKDLLRA 316 (408)
T ss_pred HHHHHHHHC
T ss_conf 999986401