HHsearch alignment for GI: 254780567 and conserved domain: COG1224

>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].
Probab=98.49  E-value=1.4e-05  Score=54.18  Aligned_cols=112  Identities=14%  Similarity=0.149  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHCCCC-C-EEEEECCCCCCH--------HHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             33545554311234-2-156403543200--------2234566788521222450788978999999998666289798
Q gi|254780567|r  125 QLFHIINSIHQYDS-S-LLMTARTFPVSW--------GVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFID  194 (246)
Q Consensus       125 ~lf~l~n~~~~~~~-~-iilts~~~p~~~--------~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~  194 (246)
T Consensus       306 E~FsFlnrAlEse~aPIii~AtNRG~~kiRGTd~~sPhGIP~DlLDRl---lII~t~py~~~EireIi~iRa~ee~i~l~  382 (450)
T COG1224         306 ECFSFLNRALESELAPIIILATNRGMTKIRGTDIESPHGIPLDLLDRL---LIISTRPYSREEIREIIRIRAKEEDIELS  382 (450)
T ss_pred             HHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHE---EEEECCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf             899999987631467579997177500121667768888987666225---67744779889999999976435403048


Q ss_pred             HHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHH
Q ss_conf             899999994066-79899999999999999984-7787889999999
Q gi|254780567|r  195 KKLAAYIVQRME-RSLVFAEKLVDKMDNLALSR-GMGITRSLAAEVL  239 (246)
Q Consensus       195 ~~v~~yl~~r~~-Rs~~~l~~~l~~Ld~~sl~~-kr~ITi~lvk~vL  239 (246)
T Consensus       383 ~~Ale~L~~ig~etSLRYa~qLL~pa~iiA~~rg~~~V~~~dVe~a~  429 (450)
T COG1224         383 DDALEYLTDIGEETSLRYAVQLLTPASIIAKRRGSKRVEVEDVERAK  429 (450)
T ss_pred             HHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHH
T ss_conf             88999997515034489999861688899987179746566799999