HHsearch alignment for GI: 254780567 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=99.07  E-value=5.7e-09  Score=75.10  Aligned_cols=192  Identities=15%  Similarity=0.168  Sum_probs=121.2

Q ss_pred             HHHHHHHHHHHCC-CCCEEEEECCCCCCHHHHHHHHHHHHCC-------CCHHHHHHH--------HHH-----------
Q ss_conf             9999999851016-7884999878777868899999986276-------201356764--------445-----------
Q gi|254780567|r   50 EQAVRLIDSWPSW-PSRVVILVGPSGSGKSCLANIWSDKSRS-------TRFSNIAKS--------LDS-----------  102 (246)
Q Consensus        50 ~~A~~~i~~~~~~-~~~~l~i~G~~GsGKTHLl~a~~~~~~~-------~~~~~~~~~--------~~~-----------  102 (246)
T Consensus        28 ~l~~~l~~~~~~~~p~n-~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t~~~i~~~i~~~~~~~p~~g~~  106 (366)
T COG1474          28 QLASFLAPALRGERPSN-IIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRTPYQVLSKILNKLGKVPLTGDS  106 (366)
T ss_pred             HHHHHHHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf             99999999855899860-79988999873289999999997331567579995130787879999999982689976763


Q ss_pred             ---------HHHH---HHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHCCEE
Q ss_conf             ---------4666---6665334332100376-10335455543112342156403-54320022345667885212224
Q gi|254780567|r  103 ---------ILID---TRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDSSLLMTAR-TFPVSWGVCLPDLCSRLKAATVV  168 (246)
Q Consensus       103 ---------~~~~---~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~~iilts~-~~p~~~~~~l~DL~SRl~~g~~~  168 (246)
T Consensus       107 ~~~~~~~l~~~~~~~~~~~IvvLDEid~L~~~~~~~LY~L~r~~~~~~~~v~vi~i~n~~~~~~~ld~rv~s~l~~~~-I  185 (366)
T COG1474         107 SLEILKRLYDNLSKKGKTVIVILDEVDALVDKDGEVLYSLLRAPGENKVKVSIIAVSNDDKFLDYLDPRVKSSLGPSE-I  185 (366)
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCHHHHEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCE-E
T ss_conf             268999999977741875999976476541546414551112477675379999973548899987566765068763-5


Q ss_pred             EECCCCHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH---HHHC-CCCCHHHHHHHHHHH
Q ss_conf             50788978999999998666--28979889999999406679899999999999999---9847-787889999999867
Q gi|254780567|r  169 KISLPDDDFLEKVIVKMFAD--RQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLA---LSRG-MGITRSLAAEVLKET  242 (246)
Q Consensus       169 ~I~~pdde~~~~il~k~~~~--r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~s---l~~k-r~ITi~lvk~vL~~~  242 (246)
T Consensus       186 ~F~pY~a~el~~Il~~R~~~~~~~~~~~~~vl~lia~~~a~~~GDAR~aidilr~A~eiAe~~~~~~v~~~~v~~a~~~~  265 (366)
T COG1474         186 VFPPYTAEELYDILRERVEEGFSAGVIDDDVLKLIAALVAAESGDARKAIDILRRAGEIAEREGSRKVSEDHVREAQEEI  265 (366)
T ss_pred             EECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             52898989999999999985404687480399999998876186477608999999998654078853700478899875


Q ss_pred             H
Q ss_conf             4
Q gi|254780567|r  243 Q  243 (246)
Q Consensus       243 ~  243 (246)
T Consensus       266 ~  266 (366)
T COG1474         266 E  266 (366)
T ss_pred             H
T ss_conf             0