HHsearch alignment for GI: 254780567 and conserved domain: COG1474
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=99.07 E-value=5.7e-09 Score=75.10 Aligned_cols=192 Identities=15% Similarity=0.168 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHCC-CCCEEEEECCCCCCHHHHHHHHHHHHCC-------CCHHHHHHH--------HHH-----------
Q ss_conf 9999999851016-7884999878777868899999986276-------201356764--------445-----------
Q gi|254780567|r 50 EQAVRLIDSWPSW-PSRVVILVGPSGSGKSCLANIWSDKSRS-------TRFSNIAKS--------LDS----------- 102 (246)
Q Consensus 50 ~~A~~~i~~~~~~-~~~~l~i~G~~GsGKTHLl~a~~~~~~~-------~~~~~~~~~--------~~~----------- 102 (246)
T Consensus 28 ~l~~~l~~~~~~~~p~n-~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t~~~i~~~i~~~~~~~p~~g~~ 106 (366)
T COG1474 28 QLASFLAPALRGERPSN-IIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRTPYQVLSKILNKLGKVPLTGDS 106 (366)
T ss_pred HHHHHHHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999855899860-79988999873289999999997331567579995130787879999999982689976763
Q ss_pred ---------HHHH---HHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHCCEE
Q ss_conf ---------4666---6665334332100376-10335455543112342156403-54320022345667885212224
Q gi|254780567|r 103 ---------ILID---TRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDSSLLMTAR-TFPVSWGVCLPDLCSRLKAATVV 168 (246)
Q Consensus 103 ---------~~~~---~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~~iilts~-~~p~~~~~~l~DL~SRl~~g~~~ 168 (246)
T Consensus 107 ~~~~~~~l~~~~~~~~~~~IvvLDEid~L~~~~~~~LY~L~r~~~~~~~~v~vi~i~n~~~~~~~ld~rv~s~l~~~~-I 185 (366)
T COG1474 107 SLEILKRLYDNLSKKGKTVIVILDEVDALVDKDGEVLYSLLRAPGENKVKVSIIAVSNDDKFLDYLDPRVKSSLGPSE-I 185 (366)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCHHHHEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCE-E
T ss_conf 268999999977741875999976476541546414551112477675379999973548899987566765068763-5
Q ss_pred EECCCCHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH---HHHC-CCCCHHHHHHHHHHH
Q ss_conf 50788978999999998666--28979889999999406679899999999999999---9847-787889999999867
Q gi|254780567|r 169 KISLPDDDFLEKVIVKMFAD--RQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLA---LSRG-MGITRSLAAEVLKET 242 (246)
Q Consensus 169 ~I~~pdde~~~~il~k~~~~--r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~s---l~~k-r~ITi~lvk~vL~~~ 242 (246)
T Consensus 186 ~F~pY~a~el~~Il~~R~~~~~~~~~~~~~vl~lia~~~a~~~GDAR~aidilr~A~eiAe~~~~~~v~~~~v~~a~~~~ 265 (366)
T COG1474 186 VFPPYTAEELYDILRERVEEGFSAGVIDDDVLKLIAALVAAESGDARKAIDILRRAGEIAEREGSRKVSEDHVREAQEEI 265 (366)
T ss_pred EECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 52898989999999999985404687480399999998876186477608999999998654078853700478899875
Q ss_pred H
Q ss_conf 4
Q gi|254780567|r 243 Q 243 (246)
Q Consensus 243 ~ 243 (246)
T Consensus 266 ~ 266 (366)
T COG1474 266 E 266 (366)
T ss_pred H
T ss_conf 0