HHsearch alignment for GI: 254780567 and conserved domain: COG5192
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis].
Probab=96.26 E-value=0.016 Score=35.38 Aligned_cols=98 Identities=17% Similarity=0.161 Sum_probs=54.3
Q ss_pred CEEE-EECCCCCCHHHHHHHHHHHHCCCCHHHHH--------------------HHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 8499-98787778688999999862762013567--------------------64445466666653343321003761
Q gi|254780567|r 65 RVVI-LVGPSGSGKSCLANIWSDKSRSTRFSNIA--------------------KSLDSILIDTRKPVLLEDIDLLDFND 123 (246)
Q Consensus 65 ~~l~-i~G~~GsGKTHLl~a~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~iddi~~~~~~e 123 (246)
T Consensus 69 PfIvavvGPpGtGKsTLirSlVrr~tk~ti~~i~GPiTvvsgK~RRiTflEcp~Dl~~miDvaKIaDLVlLlIdgnfGfE 148 (1077)
T COG5192 69 PFIVAVVGPPGTGKSTLIRSLVRRFTKQTIDEIRGPITVVSGKTRRITFLECPSDLHQMIDVAKIADLVLLLIDGNFGFE 148 (1077)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEEECHHHHHHHHHHHHHHHEEEEEECCCCCCE
T ss_conf 75899636998874689999999987754203678647861563578988671788888768875213578863666704
Q ss_pred HHHHHHHHHHHCCCCCEEEEE------CCCCCCHHHHHHHHHHHH
Q ss_conf 033545554311234215640------354320022345667885
Q gi|254780567|r 124 TQLFHIINSIHQYDSSLLMTA------RTFPVSWGVCLPDLCSRL 162 (246)
Q Consensus 124 e~lf~l~n~~~~~~~~iilts------~~~p~~~~~~l~DL~SRl 162 (246)
T Consensus 149 METmEFLnil~~HGmPrvlgV~ThlDlfk~~stLr~~KKrlkhRf 193 (1077)
T COG5192 149 METMEFLNILISHGMPRVLGVVTHLDLFKNPSTLRSIKKRLKHRF 193 (1077)
T ss_pred EHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 248899999866489724788862113358378999998876667