HHsearch alignment for GI: 254780567 and conserved domain: KOG0736

Probab=97.50  E-value=0.0045  Score=38.78  Aligned_cols=140  Identities=18%  Similarity=0.279  Sum_probs=78.3

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH------------HH----HHHHHHHHHHHHCCC------CC
Q ss_conf             849998787778688999999862762013567644454------------66----666653343321003------76
Q gi|254780567|r   65 RVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDSI------------LI----DTRKPVLLEDIDLLD------FN  122 (246)
Q Consensus        65 ~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~i~iddi~~~~------~~  122 (246)
T Consensus       706 SGILLYGPPGTGKTLlAKAVATEcsL~FlSVKGPELLNMYVGqSE~NVR~VFerAR~A~PCVIFFDELDSlAP~RG~sGD  785 (953)
T KOG0736         706 SGILLYGPPGTGKTLLAKAVATECSLNFLSVKGPELLNMYVGQSEENVREVFERARSAAPCVIFFDELDSLAPNRGRSGD  785 (953)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHCEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf             50588779998557999998754303678505889988774301888999999854469749983121232756788788


Q ss_pred             C--------HHHHHHHHHHHC-CCCCE-EEEECCCCCCHHHHHHHHH--HHHHHCCEEEECCCCHHH-HHHHHHHHHHHC
Q ss_conf             1--------033545554311-23421-5640354320022345667--885212224507889789-999999986662
Q gi|254780567|r  123 D--------TQLFHIINSIHQ-YDSSL-LMTARTFPVSWGVCLPDLC--SRLKAATVVKISLPDDDF-LEKVIVKMFADR  189 (246)
Q Consensus       123 e--------e~lf~l~n~~~~-~~~~i-ilts~~~p~~~~~~l~DL~--SRl~~g~~~~I~~pdde~-~~~il~k~~~~r  189 (246)
T Consensus       786 SGGVMDRVVSQLLAELDgls~~~s~~VFViGATNRPDLLD---pALLRPGRFDK--LvyvG~~~d~esk~~vL~A--lTr  858 (953)
T KOG0736         786 SGGVMDRVVSQLLAELDGLSDSSSQDVFVIGATNRPDLLD---PALLRPGRFDK--LVYVGPNEDAESKLRVLEA--LTR  858 (953)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC---HHHCCCCCCCE--EEEECCCCCHHHHHHHHHH--HHH
T ss_conf             6540899999999986266678888659982588855457---65538876552--4885588567889999999--887


Q ss_pred             CCCCCHHH-HHHHHHCCCCCHHH
Q ss_conf             89798899-99999406679899
Q gi|254780567|r  190 QIFIDKKL-AAYIVQRMERSLVF  211 (246)
Q Consensus       190 ~i~l~~~v-~~yl~~r~~Rs~~~  211 (246)
T Consensus       859 kFkLdedVdL~eiAk~cp~~~TG  881 (953)
T KOG0736         859 KFKLDEDVDLVEIAKKCPPNMTG  881 (953)
T ss_pred             HCCCCCCCCHHHHHHHCCCCCCH
T ss_conf             70287876799999638967752