HHsearch alignment for GI: 254780567 and conserved domain: KOG0989

Probab=99.43  E-value=3.4e-12  Score=94.95  Aligned_cols=206  Identities=17%  Similarity=0.200  Sum_probs=130.7

Q ss_pred             CCCCCCCCCCCCCCCCCCC---CCCCEEECCCHHHHHHHHHHHHCC-CCCEEEEECCCCCCHHHHHHHHHHHHCC-CCHH
Q ss_conf             5348103415588877668---845416536189999999851016-7884999878777868899999986276-2013
Q gi|254780567|r   20 QPKNKEEQLFFSFPRCLGI---SRDDLLVHSAIEQAVRLIDSWPSW-PSRVVILVGPSGSGKSCLANIWSDKSRS-TRFS   94 (246)
Q Consensus        20 ~~~~~~~Ql~l~~~~~~~~---~~dnFiv~~~N~~A~~~i~~~~~~-~~~~l~i~G~~GsGKTHLl~a~~~~~~~-~~~~   94 (246)
T Consensus        12 ~~~~~~~~~p~~~swteKYrPkt~de~~-g--Qe~vV~~L~~a~~~~~lp~~LFyGPpGTGKTStalafar~L~~~~~~~   88 (346)
T KOG0989          12 EGEESDKSVPKHRSWTEKYRPKTFDELA-G--QEHVVQVLKNALLRRILPHYLFYGPPGTGKTSTALAFARALNCEQLFP   88 (346)
T ss_pred             CCCCCCCCCCCCCCHHHHHCCCCHHHHC-C--HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf             5333235687765537874787377650-1--599999999998606886078668999867689999999855742355


Q ss_pred             HHHHH------------------H----------HHHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             56764------------------4----------4546666665334332100376-10335455543112342156403
Q gi|254780567|r   95 NIAKS------------------L----------DSILIDTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDSSLLMTAR  145 (246)
Q Consensus        95 ~~~~~------------------~----------~~~~~~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~~iilts~  145 (246)
T Consensus        89 ~rvl~lnaSderGisvvr~Kik~fakl~~~~~~~~~~~~~~fKiiIlDEcdsmtsdaq~aLrr~mE~~s~~trFiLIcny  168 (346)
T KOG0989          89 CRVLELNASDERGISVVREKIKNFAKLTVLLKRSDGYPCPPFKIIILDECDSMTSDAQAALRRTMEDFSRTTRFILICNY  168 (346)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             54243136600143100665237998750255656788986328997416453099999999998625466599997388


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             54320022345667885212224507889789999999986662897988999999940667989999999999999998
Q gi|254780567|r  146 TFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALS  225 (246)
Q Consensus       146 ~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~  225 (246)
T Consensus       169 -----lsrii~pi~SRC~K---frFk~L~d~~iv~rL~~Ia~~E~v~~d~~al~~I~~~S~GdLR~A---it~Lqsls~-  236 (346)
T KOG0989         169 -----LSRIIRPLVSRCQK---FRFKKLKDEDIVDRLEKIASKEGVDIDDDALKLIAKISDGDLRRA---ITTLQSLSL-  236 (346)
T ss_pred             -----HHHCCHHHHHHHHH---HCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH---HHHHHHHHC-
T ss_conf             -----56477287746777---128876447899999999888589978789999999738728999---999998610-


Q ss_pred             HCCCCCHHHHHHHHH
Q ss_conf             477878899999998
Q gi|254780567|r  226 RGMGITRSLAAEVLK  240 (246)
Q Consensus       226 ~kr~ITi~lvk~vL~  240 (246)
T Consensus       237 ~gk~It~~~~~e~~~  251 (346)
T KOG0989         237 LGKRITTSLVNEELA  251 (346)
T ss_pred             CCCCCCHHHHHHHHH
T ss_conf             476364588999986