HHsearch alignment for GI: 254780567 and conserved domain: KOG0990

Probab=97.09  E-value=0.0027  Score=40.18  Aligned_cols=187  Identities=11%  Similarity=0.072  Sum_probs=98.0

Q ss_pred             CCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC-CCEEEEECCCCCCHHHHHHHHHHHHCC-CCHHHHHHHHHH-
Q ss_conf             34155888776688454165361899999998510167-884999878777868899999986276-201356764445-
Q gi|254780567|r   26 EQLFFSFPRCLGISRDDLLVHSAIEQAVRLIDSWPSWP-SRVVILVGPSGSGKSCLANIWSDKSRS-TRFSNIAKSLDS-  102 (246)
Q Consensus        26 ~Ql~l~~~~~~~~~~dnFiv~~~N~~A~~~i~~~~~~~-~~~l~i~G~~GsGKTHLl~a~~~~~~~-~~~~~~~~~~~~-  102 (246)
T Consensus        25 ~~~~~pwvekyrP~~l~dv~--~~~ei~st~~~~~~~~~lPh~L~YgPPGtGktsti~a~a~~ly~~~~~~~m~lelnaS  102 (360)
T KOG0990          25 PQYPQPWVEKYRPPFLGIVI--KQEPIWSTENRYSGMPGLPHLLFYGPPGTGKTSTILANARDFYSPHPTTSMLLELNAS  102 (360)
T ss_pred             CCCCCCCCCCCCCCHHHHHH--CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCC
T ss_conf             45688876688982256673--3772124788862688897534348998899873666566505899824699986436


Q ss_pred             ----------------------HHH--HHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf             ----------------------466--66665334332100376-10335455543112342156403543200223456
Q gi|254780567|r  103 ----------------------ILI--DTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPD  157 (246)
Q Consensus       103 ----------------------~~~--~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~D  157 (246)
T Consensus       103 d~rgid~vr~qi~~fast~~~~~fst~~~fKlvILDEADaMT~~AQnALRR-viek~t~n~rF~ii~n~-~~---ki~pa  177 (360)
T KOG0990         103 DDRGIDPVRQQIHLFASTQQPTTYSTHAAFKLVILDEADAMTRDAQNALRR-VIEKYTANTRFATISNP-PQ---KIHPA  177 (360)
T ss_pred             CCCCCCCHHHHHHHHHHHCCCEECCCCCCEEEEEECCHHHHHHHHHHHHHH-HHHHHCCCEEEEEECCC-HH---HCCCH
T ss_conf             766886147888987764164000246761588733413766989999999-99871332379986167-64---46814


Q ss_pred             HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             67885212224507889789999999986662897988999999940667989999999999999998
Q gi|254780567|r  158 LCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALS  225 (246)
Q Consensus       158 L~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~  225 (246)
T Consensus       178 ~qsRctrf---rf~pl~~~~~~~r~shi~e~e~~~~~~~~~~a~~r~s~gDmr~a---~n~Lqs~~~~  239 (360)
T KOG0990         178 QQSRCTRF---RFAPLTMAQQTERQSHIRESEQKETNPEGYSALGRLSVGDMRVA---LNYLQSILKK  239 (360)
T ss_pred             HHCCCCCC---CCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_conf             64104457---87888754424678888715311038788999999867779999---9999999998