HHsearch alignment for GI: 254780567 and conserved domain: KOG1942

Probab=98.00  E-value=0.00086  Score=43.20  Aligned_cols=111  Identities=16%  Similarity=0.179  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHCCCC--CEEEEECCCCCCH---------HHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             33545554311234--2156403543200---------223456678852122245078897899999999866628979
Q gi|254780567|r  125 QLFHIINSIHQYDS--SLLMTARTFPVSW---------GVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFI  193 (246)
Q Consensus       125 ~lf~l~n~~~~~~~--~iilts~~~p~~~---------~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l  193 (246)
T Consensus       311 EcFTyL~kalES~iaPivifAsNrG~~~irGt~d~~sPhGip~dllDRl~---Iirt~~y~~~e~r~Ii~~Ra~~E~l~~  387 (456)
T KOG1942         311 ECFTYLHKALESPIAPIVIFASNRGMCTIRGTEDILSPHGIPPDLLDRLL---IIRTLPYDEEEIRQIIKIRAQVEGLQV  387 (456)
T ss_pred             HHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHEE---EEEECCCCHHHHHHHHHHHHHHHCCEE
T ss_conf             99999999862778756999627761022177678787889977861266---786036998999999999876514232


Q ss_pred             CHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHH
Q ss_conf             8899999994066-7989999999999999998477-8788999999
Q gi|254780567|r  194 DKKLAAYIVQRME-RSLVFAEKLVDKMDNLALSRGM-GITRSLAAEV  238 (246)
Q Consensus       194 ~~~v~~yl~~r~~-Rs~~~l~~~l~~Ld~~sl~~kr-~ITi~lvk~v  238 (246)
T Consensus       388 ~e~a~~~l~~~gt~tsLRy~vqLl~p~~~~ak~~g~~~i~v~dvee~  434 (456)
T KOG1942         388 EEEALDLLAEIGTSTSLRYAVQLLTPASILAKTNGRKEISVEDVEEV  434 (456)
T ss_pred             CHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCEEECCCHHHH
T ss_conf             28899998760541457889885378889998719853431248999