HHsearch alignment for GI: 254780567 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=99.32 E-value=2e-10 Score=83.98 Aligned_cols=207 Identities=12% Similarity=0.103 Sum_probs=122.4
Q ss_pred CCCCCCCCEEECCCHHH--HHHHHHHHHCC-CCCEEEEECCCCCCHHHHHHHHHHHHCC-------CCHHHHHH------
Q ss_conf 76688454165361899--99999851016-7884999878777868899999986276-------20135676------
Q gi|254780567|r 35 CLGISRDDLLVHSAIEQ--AVRLIDSWPSW-PSRVVILVGPSGSGKSCLANIWSDKSRS-------TRFSNIAK------ 98 (246)
Q Consensus 35 ~~~~~~dnFiv~~~N~~--A~~~i~~~~~~-~~~~l~i~G~~GsGKTHLl~a~~~~~~~-------~~~~~~~~------ 98 (246)
T Consensus 24 ~~~yvP~~l~-~Re~Ei~~l~~~l~~~l~g~~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~~~~t~~~i 102 (394)
T PRK00411 24 EPDYVPENLP-HREEQIEELAFALRPALRGSRPSNVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQIDRTRYAI 102 (394)
T ss_pred CCCCCCCCCC-CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
T ss_conf 9988899898-859999999999999975999984799889999899999999999997468965999969668989999
Q ss_pred ------HHH------------HHH------HH---HHHHHHHHHHHCCCC-C-CHHHHHHHHHHH--C-CCCCEEEEECC
Q ss_conf ------444------------546------66---666533433210037-6-103354555431--1-23421564035
Q gi|254780567|r 99 ------SLD------------SIL------ID---TRKPVLLEDIDLLDF-N-DTQLFHIINSIH--Q-YDSSLLMTART 146 (246)
Q Consensus 99 ------~~~------------~~~------~~---~~~~i~iddi~~~~~-~-ee~lf~l~n~~~--~-~~~~iilts~~ 146 (246)
T Consensus 103 ~~~i~~~L~~~~~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~~~~~~~vLY~L~r~~~~~~~~~~~vI~IsN~ 182 (394)
T PRK00411 103 LSEIARSLFGHPPPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLVEKEGNDVLYSLLRAHEEYPGARIGVIGISSD 182 (394)
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECC
T ss_conf 99999995699898778789999999999861669758999965540203665089999985402268873899999768
Q ss_pred CCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-
Q ss_conf 4320022345667885212224507889789999999986662--8979889999999406679899999999999999-
Q gi|254780567|r 147 FPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADR--QIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLA- 223 (246)
Q Consensus 147 ~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r--~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~s- 223 (246)
T Consensus 183 -~~~~~~Ldprv~S~l~~-~~i~F~PY~~~qL~~IL~~R~~~af~~gv~~~~~i~~~A~~~a~~~GDaR~Aldllr~A~e 260 (394)
T PRK00411 183 -LTFLYILDPRVKSVFGP-EEIVFPPYTADEIFDILKDRVEEGFYPGVVSDEVLELIADLTGREHGDARVAIDLLRRAGE 260 (394)
T ss_pred -CCHHHHHHHHHHCCCCC-EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf -71776640777502786-2898589998999999999998414556789789999999985504758999999999999
Q ss_pred --HHH-CCCCCHHHHHHHHHHHHC
Q ss_conf --984-778788999999986741
Q gi|254780567|r 224 --LSR-GMGITRSLAAEVLKETQQ 244 (246)
Q Consensus 224 --l~~-kr~ITi~lvk~vL~~~~~ 244 (246)
T Consensus 261 ~Ae~~g~~~Vt~~hV~~A~~~~~~ 284 (394)
T PRK00411 261 IAEREGSRKVTEEDVRKAYEKSEP 284 (394)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf 999718996589999999998600