HHsearch alignment for GI: 254780567 and conserved domain: PRK00889

Probab=96.23  E-value=0.011  Score=36.36  Aligned_cols=109  Identities=12%  Similarity=0.161  Sum_probs=52.0

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CHHHHHHHHHHHCCCCC
Q ss_conf             88499987877786889999998627620135676444546666665334332100376----10335455543112342
Q gi|254780567|r   64 SRVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDSILIDTRKPVLLEDIDLLDFN----DTQLFHIINSIHQYDSS  139 (246)
Q Consensus        64 ~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iddi~~~~~~----ee~lf~l~n~~~~~~~~  139 (246)
T Consensus         4 g~viWltGlsgSGKTTia~~l~~~L~~~~~~~~~LDGD-----~lR~~l~~~lgfs~~dR~~n~~r~~~la~~l~~~g~-   77 (175)
T PRK00889          4 GVTVWFTGLSGAGKTTISHALAEKLRARGYPVEVLDGD-----IVRTNLSKGLGFSKEDRDTNIRRIGFVAHLLTRHGV-   77 (175)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCH-----HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-
T ss_conf             88999889899999999999999999869967997768-----888753678898989999999999999999981898-


Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHH
Q ss_conf             15640354320022345667885212224507889789999
Q gi|254780567|r  140 LLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEK  180 (246)
Q Consensus       140 iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~  180 (246)
T Consensus        78 ~vIvs~isp~~--~~R~~~r~~~~~~~EIyv~~~l~~~~~R  116 (175)
T PRK00889         78 IVLVSAISPYR--ETREEVRGTIGNFVEVFVNAPLEVCEQR  116 (175)
T ss_pred             EEEEEECCCCH--HHHHHHHHHCCCCEEEEECCCHHHHHHC
T ss_conf             68885047999--9999999857876699842888999880