HHsearch alignment for GI: 254780567 and conserved domain: PRK04195

Probab=99.70  E-value=1.3e-15  Score=116.04  Aligned_cols=188  Identities=21%  Similarity=0.278  Sum_probs=124.2

Q ss_pred             CCCCEEECCCH--HHHHHHHHHHHCC--CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHH------H-------
Q ss_conf             84541653618--9999999851016--78849998787778688999999862762013567644------4-------
Q gi|254780567|r   39 SRDDLLVHSAI--EQAVRLIDSWPSW--PSRVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSL------D-------  101 (246)
Q Consensus        39 ~~dnFiv~~~N--~~A~~~i~~~~~~--~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~------~-------  101 (246)
T Consensus        12 ~~~div-g~~~~v~~l~~Wl~~w~~g~~~~k~lLL~GPpGvGKTT~a~~lAk~~g~~viElNASD~R~~~~I~~~i~~~~   90 (403)
T PRK04195         12 SLSDVV-GNEKAKKQLREWIESWLKGKPPKKALLLYGPPGVGKTSLAHALANDYGWEVIELNASDQRTKDVIERVAGEAS   90 (403)
T ss_pred             CHHHHH-CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf             899985-8899999999999998739965746998893998799999999998499859977101147899999999876


Q ss_pred             ---HHHHHHHHHHHHHHHHCCCCCCH-H-HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHH
Q ss_conf             ---54666666533433210037610-3-354555431123421564035432002234566788521222450788978
Q gi|254780567|r  102 ---SILIDTRKPVLLEDIDLLDFNDT-Q-LFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDD  176 (246)
Q Consensus       102 ---~~~~~~~~~i~iddi~~~~~~ee-~-lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde  176 (246)
T Consensus        91 ~~~sl~~~~~KlIIlDEvD~l~~~~d~gg~~al~~~ik~s~~PiIli~Nd~---~~~~~~~lrs~c---~~i~F~~~~~~  164 (403)
T PRK04195         91 TSGSLFGAKRKLILLDEVDGIHGNADRGGVRAILEIIKKAKNPIILTANDP---YDPSLRPLRNAC---LMIEFKRLSKR  164 (403)
T ss_pred             HCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC---CCCCHHHHHHHH---HHCCCCCCCHH
T ss_conf             068877887349996343445724447999999999854887089982684---556717799766---12217994999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf             9999999986662897988999999940667989999999999999998477878899999
Q gi|254780567|r  177 FLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAE  237 (246)
Q Consensus       177 ~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~  237 (246)
T Consensus       165 ~I~~~L~~I~~~Egi~i~~~aL~~Ia~~s~GDlR~a---IN~LQ~~~~-~~~~~~~~~~~~  221 (403)
T PRK04195        165 SIVPVLKRICRKEGIECEEEALREIAERSGGDLRSA---INDLQAIAE-GGGRITLDDVKT  221 (403)
T ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHH---HHHHHHHHC-CCCCCCHHHHHH
T ss_conf             999999999997699999999999999879739999---999999974-899775666664