HHsearch alignment for GI: 254780567 and conserved domain: PRK05022

Probab=97.97  E-value=0.00012  Score=48.59  Aligned_cols=177  Identities=13%  Similarity=0.134  Sum_probs=103.8

Q ss_pred             EEECCCHHH--HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC-----CCCHHHHHHHHH--H--HH-------
Q ss_conf             165361899--99999851016788499987877786889999998627-----620135676444--5--46-------
Q gi|254780567|r   43 LLVHSAIEQ--AVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSR-----STRFSNIAKSLD--S--IL-------  104 (246)
Q Consensus        43 Fiv~~~N~~--A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~-----~~~~~~~~~~~~--~--~~-------  104 (246)
T Consensus       187 elIG~S~~m~~l~~~i~~vA~s-d~pVLI~GEtGTGKelvAr~IH~~S~R~~~Pfv~vNCaalpe~l~EseLFGh~kGaF  265 (510)
T PRK05022        187 EMIGQSPAMQQLKKEIEVVAAS-DLNVLITGETGVGKELVARAIHQASPRAVKPLVYLNCAALPESLAESELFGHVKGAF  265 (510)
T ss_pred             CEEECCHHHHHHHHHHHHHHCC-CCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCC
T ss_conf             7520899999999999999689-998898898981399999999966887899857888999985678998659777886


Q ss_pred             ------------HHHHHHHHHHHHHCCCCC-CHHHHHHHHHH----------HCCCCCEEEEECCCCCCH---HHHHHHH
Q ss_conf             ------------666665334332100376-10335455543----------112342156403543200---2234566
Q gi|254780567|r  105 ------------IDTRKPVLLEDIDLLDFN-DTQLFHIINSI----------HQYDSSLLMTARTFPVSW---GVCLPDL  158 (246)
Q Consensus       105 ------------~~~~~~i~iddi~~~~~~-ee~lf~l~n~~----------~~~~~~iilts~~~p~~~---~~~l~DL  158 (246)
T Consensus       266 tGA~~~r~G~fe~A~gGTLfLDEI~~Lpl~~Q~KLLrvLq~g~iqrvG~~~~~~vdvRIIAATnrdL~~~V~~G~FR~DL  345 (510)
T PRK05022        266 TGAISNRSGKFELADGGTLFLDEIGELPLALQAKLLRVLQYGEIQRVGSDRSLRVDVRVIAATNRDLREEVLAGRFRADL  345 (510)
T ss_pred             CCCCCCCCCCEEECCCCEEEEECHHHCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEECCCCHHHHHHCCCHHHHH
T ss_conf             88655678810177898798757454999999999999847958855899466666899960783599998839638999


Q ss_pred             HHHHHHCCEEEECCCCH--HHHHH----HHHHHHHH---CCCCCCHHHHHHHHHC-CCCCHHHHHHHHHHHHH
Q ss_conf             78852122245078897--89999----99998666---2897988999999940-66798999999999999
Q gi|254780567|r  159 CSRLKAATVVKISLPDD--DFLEK----VIVKMFAD---RQIFIDKKLAAYIVQR-MERSLVFAEKLVDKMDN  221 (246)
Q Consensus       159 ~SRl~~g~~~~I~~pdd--e~~~~----il~k~~~~---r~i~l~~~v~~yl~~r-~~Rs~~~l~~~l~~Ld~  221 (246)
T Consensus       346 YyRLsv~-~I~vPPLRER~eDI~lLa~~FLe~~~~~~g~~~~~ls~eAl~~L~~Y~WPGNVRELenvIeRA~l  417 (510)
T PRK05022        346 YHRLSVF-PLPVPPLRERGDDVLLLAGYFLEQNRLRLGLSSLRLSPDAQAALLQYDWPGNVRELEHVISRAAL  417 (510)
T ss_pred             HHHHHCC-CCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             9876204-03480865555409999999999999982989898889999999709999789999999999999