HHsearch alignment for GI: 254780567 and conserved domain: PRK05342

>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.
Probab=98.04  E-value=9.4e-05  Score=49.14  Aligned_cols=191  Identities=16%  Similarity=0.216  Sum_probs=104.4

Q ss_pred             CCCCCCCCCCCCCEEECCCHHH---HHHHHHHHH------CC------CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf             5888776688454165361899---999998510------16------78849998787778688999999862762013
Q gi|254780567|r   30 FSFPRCLGISRDDLLVHSAIEQ---AVRLIDSWP------SW------PSRVVILVGPSGSGKSCLANIWSDKSRSTRFS   94 (246)
Q Consensus        30 l~~~~~~~~~~dnFiv~~~N~~---A~~~i~~~~------~~------~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~   94 (246)
T Consensus        60 lp~P~eI~~~LD~yVIGQ~~AKk~lsVAvyNHykRi~~~~~~~~~vei~KsNILliGPTG~GKTlla~tLAk~l~vPF~i  139 (411)
T PRK05342         60 LPTPKEIKAHLDQYVIGQERAKKVLSVAVYNHYKRLRQNGSKSDDVELQKSNILLIGPTGSGKTLLAQTLARILNVPFAI  139 (411)
T ss_pred             CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf             99979999986214028488889999999999999860213356652134538998999977889999999986999899


Q ss_pred             HHH-------------HHH---------HHHHHHHHHHHHHHHHHCCCC---------------CCHHHHHHHHHHHCC-
Q ss_conf             567-------------644---------454666666533433210037---------------610335455543112-
Q gi|254780567|r   95 NIA-------------KSL---------DSILIDTRKPVLLEDIDLLDF---------------NDTQLFHIINSIHQY-  136 (246)
Q Consensus        95 ~~~-------------~~~---------~~~~~~~~~~i~iddi~~~~~---------------~ee~lf~l~n~~~~~-  136 (246)
T Consensus       140 aDAT~lTEaGYVGeDVE~ii~~Llq~Ad~dve~Ae~GIV~IDEIDKIarks~~~s~trDVSgEGVQqaLLkiiEGt~v~v  219 (411)
T PRK05342        140 ADATTLTEAGYVGEDVENILLKLLQAADYDVEKAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASV  219 (411)
T ss_pred             EEECEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEECC
T ss_conf             86120012674560799999999998288899883682888502345424788888777651248999999875871411


Q ss_pred             -----------------CCCEEEEECCCCC---------------------------------------CHH--HHHHHH
Q ss_conf             -----------------3421564035432---------------------------------------002--234566
Q gi|254780567|r  137 -----------------DSSLLMTARTFPV---------------------------------------SWG--VCLPDL  158 (246)
Q Consensus       137 -----------------~~~iilts~~~p~---------------------------------------~~~--~~l~DL  158 (246)
T Consensus       220 p~~ggrkhp~~~~~~idT~nILFI~gGAF~GL~~II~~R~~~~~iGF~~~~~~~~~~~~~~~l~~v~p~DLi~fGlIPEf  299 (411)
T PRK05342        220 PPQGGRKHPQQEFIQVDTTNILFICGGAFDGLEKIIKQRLGKSGIGFGAEVKSKDEKDLGELLAQVEPEDLVKFGLIPEF  299 (411)
T ss_pred             CCCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCHHH
T ss_conf             88877778776516761471799911553358999986357887677887664110005678762798788873883776


Q ss_pred             HHHHHHCCEEEECCCCHHHHHHHHH-----------HHHHHCCCC--CCHHHHHHHHHCCC---CCHHHHHHHHHHHHHH
Q ss_conf             7885212224507889789999999-----------986662897--98899999994066---7989999999999999
Q gi|254780567|r  159 CSRLKAATVVKISLPDDDFLEKVIV-----------KMFADRQIF--IDKKLAAYIVQRME---RSLVFAEKLVDKMDNL  222 (246)
Q Consensus       159 ~SRl~~g~~~~I~~pdde~~~~il~-----------k~~~~r~i~--l~~~v~~yl~~r~~---Rs~~~l~~~l~~Ld~~  222 (246)
T Consensus       300 iGRlP--Viv~L~~L~~~~L~~ILtePkNaLikQY~~LF~~dgV~L~Ft~~AL~~IA~~A~~~~tGARgLRsIlE~iLld  377 (411)
T PRK05342        300 IGRLP--VVATLEELDEEALVRILTEPKNALVKQYQKLFEMDGVELEFTDDALEAIAKKAIERKTGARGLRSILEEVLLD  377 (411)
T ss_pred             HCCCC--EEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             14664--0546244799999999658741599999999975496799868999999999998475745779999999788