HHsearch alignment for GI: 254780567 and conserved domain: PRK05541

Probab=95.24  E-value=0.022  Score=34.58  Aligned_cols=106  Identities=11%  Similarity=0.081  Sum_probs=51.8

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--C---HHHHHHHHHHHCCC
Q ss_conf             788499987877786889999998627620135676444546666665334332100376--1---03354555431123
Q gi|254780567|r   63 PSRVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDSILIDTRKPVLLEDIDLLDFN--D---TQLFHIINSIHQYD  137 (246)
Q Consensus        63 ~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iddi~~~~~~--e---e~lf~l~n~~~~~~  137 (246)
T Consensus         6 kg~viW~TGLsGSGKTTiA~~l~~~L~~~g~~~~~LDGD~--l---R~~~-~~~-gfs~~~R~~n~~r~~~lak~l~~~g   78 (176)
T PRK05541          6 NGYVIWITGLAGSGKTTIAKALYERLKLKYSNVIYLDGDE--L---REIF-GHS-GYDKESRIEMALKRAKLAAFLADQG   78 (176)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCHH--H---HHHH-CCC-CCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             8679997899999899999999999997599779988689--9---9873-658-9899999999999999999986469


Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHH
Q ss_conf             42156403543200223456678852122245078897899
Q gi|254780567|r  138 SSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFL  178 (246)
Q Consensus       138 ~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~  178 (246)
T Consensus        79 ~-~vIvs~isp~~~--~R~~~R~~~~~~~EVyv~~ple~~~  116 (176)
T PRK05541         79 M-IVIVTTISMFNE--IYAYNRKHLPNYFEVYLKCDMEELI  116 (176)
T ss_pred             C-CEEEEECCCCHH--HHHHHHHHCCCCEEEEEECCHHHHH
T ss_conf             8-036752279899--9999997488768999948999998