HHsearch alignment for GI: 254780567 and conserved domain: PRK05564

>PRK05564 DNA polymerase III subunit delta'; Validated.
Probab=98.43  E-value=1.6e-06  Score=59.95  Aligned_cols=164  Identities=18%  Similarity=0.149  Sum_probs=91.9

Q ss_pred             CCCCCEEECCCHHHHHHHHHHHHCC--CCCEEEEECCCCCCHHHHHHHHHHHHCCC-----CHHHHH---HHHHH-----
Q ss_conf             8845416536189999999851016--78849998787778688999999862762-----013567---64445-----
Q gi|254780567|r   38 ISRDDLLVHSAIEQAVRLIDSWPSW--PSRVVILVGPSGSGKSCLANIWSDKSRST-----RFSNIA---KSLDS-----  102 (246)
Q Consensus        38 ~~~dnFiv~~~N~~A~~~i~~~~~~--~~~~l~i~G~~GsGKTHLl~a~~~~~~~~-----~~~~~~---~~~~~-----  102 (246)
T Consensus         1 M~f~~ii---Gq~~i~~~L~~~i~~~rl~HAyLF~Gp~G~GK~~~A~~~A~~ll~~~~~~~~~D~~~~~~~~~~~I~vd~   77 (313)
T PRK05564          1 MSFRTII---GHENIKNRIDNSIIKGKFSHASLIVGEDGIGKSILAKEIANKILGKSEQREYVDIIEYKPINKKSIGVDD   77 (313)
T ss_pred             CCHHHCC---CHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHH
T ss_conf             9832326---8299999999999879987504327999850999999999998289977889865886332256999899


Q ss_pred             -----------HHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHHHHHHHHCCEEE
Q ss_conf             -----------46666665334332100376-1033545554311234-2156403543200223456678852122245
Q gi|254780567|r  103 -----------ILIDTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDS-SLLMTARTFPVSWGVCLPDLCSRLKAATVVK  169 (246)
Q Consensus       103 -----------~~~~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~-~iilts~~~p~~~~~~l~DL~SRl~~g~~~~  169 (246)
T Consensus        78 IR~l~~~~~~~p~~g~~KV~II~~ae~m~~~AaNALLKtL---EEPP~~t~fIL~t~~~~~---lLpTI~SRCQ---~~~  148 (313)
T PRK05564         78 IRNIIEEVNKKPYEGDKKVIIIYKSEKMTEQAQNAFLKTI---EEPPKGVFIILLCENLEQ---ILDTIKSRCQ---IYK  148 (313)
T ss_pred             HHHHHHHHHHCCCCCCCEEEEECCHHHHCHHHHHHHHHCC---CCCCCCEEEEEEECCHHH---CCCHHHCCCE---EEE
T ss_conf             9999999840862589569998077775899999984550---368998589986498354---7577870653---566


Q ss_pred             ECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             078897899999999866628979889999999406679899999999
Q gi|254780567|r  170 ISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVD  217 (246)
Q Consensus       170 I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~  217 (246)
T Consensus       149 f~~l~~~~i~~~L~~~~----~~~~~~~~~~~~~~s~G~~~~a~~~~~  192 (313)
T PRK05564        149 LNRLSKEDIEKFISYKY----NDIDEENKNSAIAFSDGIPGKVEKFIE  192 (313)
T ss_pred             CCCCCHHHHHHHHHHHC----CCCCHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             89989999999999862----589999999999982998799999840