HHsearch alignment for GI: 254780567 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.36 E-value=4.8e-11 Score=87.88 Aligned_cols=195 Identities=14% Similarity=0.119 Sum_probs=127.3
Q ss_pred CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHC-CCC-CEEEEECCCCCCHHHHHHHHHHHHCCCCHH----------HHH
Q ss_conf 58887766884541653618999999985101-678-849998787778688999999862762013----------567
Q gi|254780567|r 30 FSFPRCLGISRDDLLVHSAIEQAVRLIDSWPS-WPS-RVVILVGPSGSGKSCLANIWSDKSRSTRFS----------NIA 97 (246)
Q Consensus 30 l~~~~~~~~~~dnFiv~~~N~~A~~~i~~~~~-~~~-~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~----------~~~ 97 (246)
T Consensus 6 la~KYRP~-~F~dvv-GQ--e~vv~~L~nai~~~rl~HAyLFsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~~ 81 (560)
T PRK06647 6 TATKRRPR-DFNSLE-GQ--DFVVETLKHSIEKNKIANAYIFSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCKS 81 (560)
T ss_pred HHHHHCCC-CHHHHC-CC--HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 77642898-654403-94--999999999997499774366328998789999999999965999999888878878888
Q ss_pred ---------------H--HHH--H---------HHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCC-CEEEEECCC
Q ss_conf ---------------6--444--5---------46666665334332100376-1033545554311234-215640354
Q gi|254780567|r 98 ---------------K--SLD--S---------ILIDTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDS-SLLMTARTF 147 (246)
Q Consensus 98 ---------------~--~~~--~---------~~~~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~-~iilts~~~ 147 (246)
T Consensus 82 i~~g~~~DviEidaasn~~VddIR~l~e~v~~~P~~~~yKV~IIDEahmLt~~A~NALLKtLE---EPP~~~~FILaTte 158 (560)
T PRK06647 82 IDNDSSLDVIEIDGASNTSVQDVRQIKEEIMFPPASSRYRVYIIDEVHMLSNSAFNALLKTIE---EPPPYIVFIFATTE 158 (560)
T ss_pred HHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHH---CCCCCEEEEEECCC
T ss_conf 745999875764364548889999999986328766870699964656559999999999863---48875599997799
Q ss_pred CCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 32002234566788521222450788978999999998666289798899999994066798999999999999999847
Q gi|254780567|r 148 PVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRG 227 (246)
Q Consensus 148 p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~k 227 (246)
T Consensus 159 ~~KI---~~TI~SRCQ---~f~Fk~i~~~~I~~~L~~I~~~E~i~~e~~AL~lIa~~a~Gs~RDalslldq~i~~---~~ 229 (560)
T PRK06647 159 VHKL---PATIKSRCQ---HFNFRLLSLEKIYEMLKKVCLEDDIKYEDEALKWIAYKSGGSVRDAYTLFDQIVSF---SN 229 (560)
T ss_pred HHHC---HHHHHHHHE---EEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC---CC
T ss_conf 4768---489996510---41055599999999999999867988799999999997789588899999999960---79
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 7878899999998
Q gi|254780567|r 228 MGITRSLAAEVLK 240 (246)
Q Consensus 228 r~ITi~lvk~vL~ 240 (246)
T Consensus 230 ~~i~~~~v~~~lG 242 (560)
T PRK06647 230 SDITLEQIRSKMG 242 (560)
T ss_pred CCCCHHHHHHHHC
T ss_conf 9778999999868