HHsearch alignment for GI: 254780567 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=99.42 E-value=1.2e-12 Score=97.76 Aligned_cols=126 Identities=16% Similarity=0.185 Sum_probs=84.7
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC-----CCCHHHHHHH---------------HHHHHHHHHHHHHH
Q ss_conf 999851016788499987877786889999998627-----6201356764---------------44546666665334
Q gi|254780567|r 54 RLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSR-----STRFSNIAKS---------------LDSILIDTRKPVLL 113 (246)
Q Consensus 54 ~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~-----~~~~~~~~~~---------------~~~~~~~~~~~i~i 113 (246)
T Consensus 174 ~fi~~F~~-~~~nLlf~G~~G~GKTfLa~~IA~ell~~g~sViy~ta~~L~~~l~~~~~~~~~~~~~~~~~l~~~DLLII 252 (330)
T PRK06835 174 NFIKNFDK-NNENLLFYGNTGTGKTFLSNCIAKELLDRGKTVIYRTSDELIENLREIRFNNDNDAPELEDLLINCDLLII 252 (330)
T ss_pred HHHHHCCC-CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEE
T ss_conf 99872478-88866988999998899999999999987994999629999999999754576448999999961898997
Q ss_pred HHHHCCCC---CCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH-HHHHHHHHHHH-CCEEEECCCCHHHHHH
Q ss_conf 33210037---61033545554311234215640354320022-34566788521-2224507889789999
Q gi|254780567|r 114 EDIDLLDF---NDTQLFHIINSIHQYDSSLLMTARTFPVSWGV-CLPDLCSRLKA-ATVVKISLPDDDFLEK 180 (246)
Q Consensus 114 ddi~~~~~---~ee~lf~l~n~~~~~~~~iilts~~~p~~~~~-~l~DL~SRl~~-g~~~~I~~pdde~~~~ 180 (246)
T Consensus 253 DDLG~E~~t~~~~~~Lf~iIN~R~~~~k~tIITTNl~~~eL~~~y~eRi~SRi~~~~~~~~~~G~DiR~~k~ 324 (330)
T PRK06835 253 DDLGTESITEFSKTELFNLINKRLLMNKKMIISTNLSLEELLKTYSERIASRLLGNFTLLKFYGEDIRIKKN 324 (330)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHH
T ss_conf 210345588689999999999998679997998899989999987489999998185499852655899998