HHsearch alignment for GI: 254780567 and conserved domain: PRK06871

>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=97.26  E-value=0.0035  Score=39.46  Aligned_cols=113  Identities=13%  Similarity=0.167  Sum_probs=59.2

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCCHH----------H------HHHHH--------HHHHH--------------
Q ss_conf             8849998787778688999999862762013----------5------67644--------45466--------------
Q gi|254780567|r   64 SRVVILVGPSGSGKSCLANIWSDKSRSTRFS----------N------IAKSL--------DSILI--------------  105 (246)
Q Consensus        64 ~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~----------~------~~~~~--------~~~~~--------------  105 (246)
T Consensus        23 ~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~sC~l~~~g~HPD~~~i~~~~~k~I~vd~IR~l~~~~~~~~  102 (324)
T PRK06871         23 HHALLFKADSGLGTEQLIRALAQWLMCQAPGDEQPCGQCHSCHLFQAGNHPDFHILEPIDGKDIGVDQVREINEKVSQFA  102 (324)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             43787689999789999999999982899999998888989999973899987998467888788999999999986462


Q ss_pred             --HHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH
Q ss_conf             --66665334332100376-1033545554311234-2156403543200223456678852122245078897899999
Q gi|254780567|r  106 --DTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDS-SLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKV  181 (246)
Q Consensus       106 --~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~-~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~i  181 (246)
T Consensus       103 ~~g~~KV~iI~~ae~m~~~AaNALLKtL---EEPp~~~~fiL~t~~~~~---ll~TI~SRCq---~~~~~~p~~~~~~~w  173 (324)
T PRK06871        103 QQGGNKVVYIQGAERLTEAAANALLKTL---EEPRPNTYFLLQADLSAS---LLATIYSRCQ---TWLIHVPEEQIALDW  173 (324)
T ss_pred             CCCCCEEEEECCHHHHHHHHHHHHHHHH---CCCCCCEEEEEEECCCCC---CCCHHHHCCC---CEECCCCCHHHHHHH
T ss_conf             2059669997588885799999999983---389878389998787010---3240862661---200899499999999


Q ss_pred             HHHH
Q ss_conf             9998
Q gi|254780567|r  182 IVKM  185 (246)
Q Consensus       182 l~k~  185 (246)
T Consensus       174 L~~~  177 (324)
T PRK06871        174 LQAQ  177 (324)
T ss_pred             HHHH
T ss_conf             9974