HHsearch alignment for GI: 254780567 and conserved domain: PRK07132
>PRK07132 DNA polymerase III subunit delta'; Validated.
Probab=97.54 E-value=0.0017 Score=41.46 Aligned_cols=127 Identities=12% Similarity=0.150 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHCC--CCCEEEEECCCCCCHHHHHHHHHHHHCCCCH---------------HHHHHH----HH------
Q ss_conf 89999999851016--7884999878777868899999986276201---------------356764----44------
Q gi|254780567|r 49 IEQAVRLIDSWPSW--PSRVVILVGPSGSGKSCLANIWSDKSRSTRF---------------SNIAKS----LD------ 101 (246)
Q Consensus 49 N~~A~~~i~~~~~~--~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~---------------~~~~~~----~~------ 101 (246)
T Consensus 3 ~e~iv~~L~nai~~~klsHAYLF~G~~G~Gk~~~a~~~a~~l~~~~~~~~~~~~~~~~~~~id~~~~~i~~~~i~~~i~~ 82 (303)
T PRK07132 3 DNNIIKSLDNLAKQNKISHSFLLKSNYNNDLDESILYFLNKFNNLQSLNLNLEELPYNIFLFDIFDEDLSKEEFLSAIEK 82 (303)
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH
T ss_conf 03899999999984997616886789986799999999999729987888754565323041332220016889999999
Q ss_pred ---HHH-HHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCH
Q ss_conf ---546-666665334332100376-10335455543112342-156403543200223456678852122245078897
Q gi|254780567|r 102 ---SIL-IDTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDSS-LLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDD 175 (246)
Q Consensus 102 ---~~~-~~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~~-iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdd 175 (246)
T Consensus 83 ~~~~~~~~~~~Kv~IIdea~~lt~~A~NaLLKtL---EEPp~~~~fil~t~~~~~---il~TI~SRCq---~~~f~~~~~ 153 (303)
T PRK07132 83 FSFSSFVSNQKKILIIKNIEKTSNSSLNALLKTI---EEPSKNTYFLLTTKNINK---VIPTIVSRCQ---VINVKEPDQ 153 (303)
T ss_pred HHHCCCCCCCEEEEEEECHHHCCHHHHHHHHHHC---CCCCCCEEEEEEECCHHH---CCHHHHHCCE---EEECCCCCH
T ss_conf 9736655687069998165533999999999870---389868489997288243---8377863665---663788999
Q ss_pred HHHHHHHHH
Q ss_conf 899999999
Q gi|254780567|r 176 DFLEKVIVK 184 (246)
Q Consensus 176 e~~~~il~k 184 (246)
T Consensus 154 ~~i~~~l~e 162 (303)
T PRK07132 154 QKILAKLLS 162 (303)
T ss_pred HHHHHHHHH
T ss_conf 999999986